Caloenas nicobarica (Nicobar pigeon): 135989086
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Entry
135989086 CDS
T11056
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135989086 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135989086 (PAPOLA)
Enzymes [BR:
cnic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
135989086 (PAPOLA)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
135989086 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
135989086
NCBI-ProteinID:
XP_065491712
LinkDB
All DBs
Position
5:complement(14577464..14626399)
Genome browser
AA seq
762 aa
AA seq
DB search
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPSHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPQINSSESSGGTSNESIPQTATQ
PAISPPPKPTISRIVSSAYLLNPSPRTSGNVATKMPSPVTAVKRTSSPHKEESPKKMKIE
EQDEISEDTSCIDLNEHEKMETKEQLETEVNVNSQTETLQTTSLQAPQLNMYGLPYKLTE
AGFALLNCAFKKTPSTDLSDIPALPANPIPVIKNSIKLRLNR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcccgttacaacccagggatcacagacacagcaactacagaagcattatggc
attacctcacctatcagtttagctgcccccaaggagtctgactgcatgcttacccagaaa
ttaatcgaaaccctaaaaccttatggtgtatttgaagaggaagaagaactgcaacgcagg
attctaattttgggaaaattaaataaccttgtaaaggaatggatacgggaaatcagtgaa
agcaagaatcttccacagtctgttatagaaaatgttggaggaaaaatttttacatttgga
tcctatagattaggggttcatacaaaaggtgctgatattgatgccctgtgcgttgcacca
agacatgttgaaagaagtgattttttcacatcgttttatgaaaaactgaaacaacaagaa
gaagtaaaagatctgagggctgttgaagaagcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagatctacgagatgatagcctactcaaaaatttagacattagatgcatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggtgtttcctgggctatgctagtagccagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacctacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcagaagtacaagcattatattgtacttctagcaagcgca
ccgacagaaaaacagcgactagaatgggtgggcttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaatgaattcattacactggctcatgtgaatccacagtcattc
ccagcacccaaggagaatcctgacaaggaagaataccgtacaatgtgggtgattgggttg
gtgtttaagaaaacagaaaattctgaaaatttaagtgttgatcttacctacgacattcag
tcttttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcatcaactgctacctagtcatgtg
cttcagaaaaagaaaaagcattcgacagaagggatcaggttgacagctctgaatgacagc
agtctagacttgtctatggacagtgataacagcacgtctgtgccttcacctactagtgct
atgaagacgagtccgttgaacagttctggaagttctcagggcagaagcagtcctgcgcca
gctgtaactgcagcatctgtgaccaacatacaggcttctgaagtaactgtgccacaaata
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacgcaa
ccagccatttctccaccaccaaagcctaccatctctagaattgtttcctctgcatatcta
ttaaatccatcaccaagaacttcaggaaatgttgcaacaaaaatgcctagccctgtcaca
gcagtgaaaaggacatcttctccacataaagaagagtctcccaagaaaatgaaaattgaa
gagcaggatgaaataagtgaagatactagctgtatagatttgaatgagcatgaaaaaatg
gaaactaaggagcaacttgagacagaagtgaatgttaattctcaaacagaaactcttcag
acaacttctctgcaagctcctcagctaaacatgtatggcttgccatacaaactgaccgaa
gctggattcgctcttctgaattgtgccttcaaaaaaacacccagtacagacctttcagat
atccctgctctccctgcaaatcctattcccgttatcaagaattcaataaaattgagattg
aaccggtaa
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