Caloenas nicobarica (Nicobar pigeon): 135989179
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Entry
135989179 CDS
T11056
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135989179 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135989179 (ABCC8)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
135989179 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
MTABC_N
RsgA_GTPase
MMR_HSR1
AAA_25
nSTAND1
TMD0_ABC
TraD_N
AAA_15
DEAD
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
135989179
NCBI-ProteinID:
XP_065491901
LinkDB
All DBs
Position
5:54084653..54165025
Genome browser
AA seq
1596 aa
AA seq
DB search
MCAEAEEAPGCAQGPAMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKNRRPSSPQGS
RSIWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTKILGVF
FISSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMQLST
SNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGISALIGA
AVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEE
TRQKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFASISLFH
ILVSPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKSSELISTDNHSKYQAVPLK
VVNRKRPAREDWNNYSSHMRRPINITEPDDFCVKITNGFFTWTPEGPPALSNIDIRIPQG
QLTMIVGQVGCGKSSLLLAILGEMQKISGNIFWSSCTSDSETGEDVSPEKESPVDTEFRK
RGSVAYASQKPWLLNATVEENITFESPFNKQRYKAVIDACSLQPDIDILPHGDQTQIGER
GINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTIVL
VTHKLQYLPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEKETIIE
RKTVLERTNLRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRACGKYLS
AAGILLLPLLVLSQLLKHTVMVAIDYCLARWTSDAIAGKTELELRNCSYCEDFNHSPYSK
VFSILCCLGIVLCLVTSIAVEWTGLKVTKKLHSSLLNKIILAPMRFFETTPLGSILNRFS
ADCNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFVIALVPLAITCYFIQKYFRVAS
RDLQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFLTAANR
WLEVRMEYIGACVVLIAAVTSITSCLYSKLSSGLVGLGLTYALMVSNYLNWMVRNLADME
IQLGAVKRINGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVN
AHISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIIL
QDPILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQ
RQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILNA
DLVIVMKRGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggaggcggaggaggcgcccggctgcgcgcagggtcccgccatggccctggct
ttctgcggcgatgagggcaactccaccgcctacaacgtggaccacggcgtgctcaacaac
ggctgcttcgtggacgcgctcaacgtggtgccccacgtcttcctgctcttcatcaccttc
cccatcctcttcatcggatggggaagccagagttccaaagtacatatacatcatagcaca
tggcttcattttcctggccacaatttacgctggatactgacttttatcctcttgtttgtg
ctggtgtgtgaaattgcagagggcatagtgtccgatggggtttcagaatcacgccattta
cacctgtacatgccagctgggatggcattcttggcggccatcacatcagttgtctattac
cataatatcgaaacatccaatttcccgaagttgttaattgcattgctgttctactggact
ttagctttcataactaaaaccatcaaatttgtcaagttctgtgataatggggttggattt
tctcagcttcggttttgcctcacaggactcctggtggttctatatggaatgctactagct
gtagaaatcaatgtcatcagggtgaggaggtatgttttcttcaaaactcctaaagaagtt
aaacctcctgaggatctccaggatctcggcgttcgattcttacagccatttgtgaatctg
ttatccaaaggaacgtactggtggatgaatacattcatcaagactgcccataaaaaacca
atagacttgaaaaccatcggcaagcttcccattgctatgagagctctgaccaattacatt
cgccttaatgaggcctttgaagcacagaagaacagaaggccgtcatctccacaaggatcc
agatcaatttggcgtgctctctgctgtgcttttgggagacccttacttctcagtagcacg
ttccgtattctggctgacttgcttggatttgctggtccgctctgcatctctgggattgtt
cacaatgttggaaaaggaaataacaccatccgcccacagactaaaattcttggcgttttc
tttatttcgtctcaagagttcctgtccaatgcttatgttttggctgtactcttatttttt
gcccttctattgcaaaggacgtttctccaagcatcgtattatgttgctattgaaacagga
atcaacttgagaggcgcaatacagacaaaaatatacaataaaattatgcagctttcaacc
tctaacatgtctatgggggagatgactgcaggccagatctgtaacctggttgccatagac
acaaatcagctgatgtggttcttttttctctgccctaacctttgggccatgccagtacag
ataattgtaggagttcttctgctctactaccttcttggaatcagtgccttaattggagca
gcagtaatcatagtccttgcacctgttcagtacttcgtagcaacaaaactctcacaggcc
cagagaagcacgttggagtactccaatgagaggctgaagaagacaaatgagatgcttcga
ggcattaagctccttaaactctatgcttgggaacacatctttcatagcagtgtagaggaa
accagacaaaaagaaatgactagcctcaagtcttttgccctttatacctccatatccatc
tttatgaatgcagcaataccaattgcagctgtacttataacatttgtggtccatgctcat
ctgacaagaaaggctgacttctccccatccgtggcatttgcctccatctccttgttccat
attctcgtgtctccattgttcctgctctccagtgtggttagatccactgtcaaagcatta
gtaagtgtgcagaaactgagtgaattcctgtcaagtgaagaaattggagaagagcatgat
aaatcttcagagctaataagtacagataatcacagcaaataccaggcagtgccgctcaag
gttgtcaaccgcaagaggcctgccagggaggactggaacaattacagctctcacatgaga
agacccattaacatcacagaacctgatgatttttgcgtaaagatcacaaatggatttttc
acttggacacctgaaggtcctccagccttgtccaacattgatatccgaatccctcaaggt
cagctaacgatgattgtaggacaggttggctgcggtaagtcatctctcttgctagccata
cttggtgagatgcagaagatctctgggaacatattctggagcagctgtacgtctgacagc
gagacgggggaagatgtcagcccagagaaagaatctcctgttgacacagaattcaggaaa
agaggatcagtagcatatgcatcacagaagccttggttgctcaatgccacagtggaagag
aatatcacatttgaaagccctttcaacaaacagaggtacaaagcagtaattgatgcttgt
tccctccagcctgatattgacattctccctcatggagaccaaacccagatcggagagagg
ggtattaatctgtctggagggcagcgccaacgcatcagcgtggcaagagcgctttaccag
cagacaaatgttgtgttcctggatgacccattttctgccctggatatccacctaagtgac
catctcatgcaagaagggatcctgaaaatgctacgggaagacaagcggaccattgtgcta
gtgactcacaagctgcagtacttgccccatgctgactggataattgcgatgaaagatgga
aacatccagagagaaggaacactcaaggacattcagaaatcagagactgagctctttgaa
cactggaagacattaatgaatcgacaagaccaagagctagagaaggagactattattgaa
agaaaaactgttttggaaagaacgaacctccggaggactatgtattcccgtgaagctctg
ctgaaagatgatgaagaggatgaagaagaagtaacagaaagtgatgatgaagacaacctg
tcttcggtgctgcatcagagagcaaagatgccctggagagcgtgcggaaagtacctcagc
gcagcaggaatcctgctcctgcctctgctggttctgtcccagctgctgaagcacacggtg
atggtggccatcgactactgcctggcgcgttggacctcagatgccattgccgggaagaca
gagctagagctgagaaactgctcttactgtgaggatttcaaccattctccatattcaaaa
gttttcagcattctctgctgtcttgggattgtattatgtcttgttacatcaatagcggtg
gagtggactggcttgaaagtcaccaaaaagctacactcttctttactaaataaaattatt
ttggctccgatgagattttttgaaacaacaccactgggaagtatcttgaacagattttca
gctgactgcaatactatcgaccagcacattccagctactctggagtgcctgagtcgttct
actttgctgtgtgtatctgctcttgctgtcatctcgtacgtcacaccaatgtttgtcatt
gccctggttcccctcgcaatcacgtgttacttcatccagaagtacttccgagtcgcatca
cgggacctgcagcagctggatgacagcactcagctaccattgctttctcatttttcagag
actgttgaaggtcttaccaccatccgagctttcaggtacgaagcgaaatttcgacaaaaa
cttcttgaatacacagattccaacaacatcgcttcccttttccttacagctgccaatcgc
tggctggaagtccgcatggagtacattggagcatgtgtggtactcatagcagctgtcact
tctattaccagttgcctgtatagtaaactctcttcgggacttgtaggcttgggactaacc
tatgctcttatggtgtctaactatctgaattggatggttcgtaacctggctgacatggag
atccagctgggtgcagtgaaaagaatcaatggccttctcaaaacagaagctgaaaattac
gaagggctcctttcttcctcacagattccccagaactggccagacagaggggagatccaa
atccagaacctcagtgtccgatatgacagcaacttaaagccagtgctgaagcatgtcaat
gcccacatctctccaggacaaaagattgggatctgcggccgaacaggcagtggaaaatct
tccttctctcttgcatttttcagaatggttgacacttttgagggaaggattatcattgat
ggcatagatatcgctaagctccccttacagacgttgagatccaggctgtcaatcattctc
caagatcccattttattcagcggaacaatccggtttaacttggaccctgagaagaagtgc
actgacagcatgctgtgggaagcactggaaatagcacagctcaagcatgtggtgaaagca
ctccctgggggcctagatgctatagtcacagaagggggtgaaaactttagccagggccaa
agacagctgttctgcctagcaagggcttttgtgcggaagacaagcatcttcatcatggat
gaagccacagcatctattgacatggcaacagagaacatactccagaaggtagtcatgacc
gcgtttgctgaccgtactgtggttacaatagcacaccgtgtgcacacaatcctcaatgca
gatttggttattgtaatgaagagaggggttattttggaatatgacaagcctgaggttctg
ctagaacaagaagacagtgtctttgcttcttttgtacaagcagataagtag
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integrated database retrieval system
