Caloenas nicobarica (Nicobar pigeon): 135989181
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Entry
135989181 CDS
T11056
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03022
Basal transcription factors
cnic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135989181 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
135989181 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135989181 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135989181 (GTF2H1)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135989181 (GTF2H1)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135989181 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
135989181
NCBI-ProteinID:
XP_065491909
UniProt:
A0A7K6SNL4
LinkDB
All DBs
Position
5:complement(53391372..53414273)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQEAIEY
EDLAKNNSIKTIALNLKKSDRYYHGPTPVQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatctgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacggtcagccatatgtatgcagatataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aacgaaagcacagcagtgaaggagcgagatgcagtaaaggaccttcttcaacaactgttg
cccaaattcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgttccagctctataaagaccttgttgtgagtcaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcaccaagtaag
caggatgtgggcatctctgcagcgtttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtacaatttgacttcagatatcatcgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgactgagcgagaattctgg
acacgattttttcaatctcattatttccatcgggacaggctcaatacgggctcaaaagac
ctctttgcggaatgtgccaaactggatgaaaaagggttaaaagcaatggtgtctcaagga
gtaaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgcttccgtggcctctacatcgaatgcctcaaaatctgctagagaaagtagcaat
gctgccattataaaacgctttaaccatcatagtgccatggtcctcgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaatgaaaaaggtgaaactgcaggaggccattgagtat
gaagatttagcaaagaataatagcattaaaacaattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccagttcaatcacagcaatatgcaactagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctgctagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaa
ctaaaacacttgtatgtggcagtcggggaactgctacgacacttctggtcctgctttcct
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaat
ttggtaagtcatatagaagagatgctgcagacggcctacaataagttccatacgtggcag
tcccggcgtatgctgaagaagacgtga
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