Caloenas nicobarica (Nicobar pigeon): 135989211
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Entry
135989211 CDS
T11056
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135989211 (WDHD1)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
135989211 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
HMG_WDHD1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
HMG_box
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
135989211
NCBI-ProteinID:
XP_065491961
LinkDB
All DBs
Position
5:3281098..3311199
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AA seq
1120 aa
AA seq
DB search
MPSAQKPMRYGHTEGHTDVCFDGTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVTFNSDGTKIAAGSSDFMVKV
VEVADSSKQKTFRGHDAPVLSLSFDPRDVYLASASCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRETWDSKLDLSDTFITQPLNIVAWSP
CGQYLAAGSVDGSIVVWNVETQECIQRMKHEKNYTICGLAWHPKHRQIAYTDTEGNLGLL
ENVSDGKKPNDKVASTVTKDYNDLFDGDDDDYLNGDMVEPQSSPKAGADEDDGDDDDLRP
TLGHLRRAVIDDDDNSVDIGMIKANLNLTEKEDGDDDQTGGFPALPLSSTQQPFYDGPMP
TPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNSLN
HTMADLSTEAVLLACESTEELVSKLHCIHFSSWDANKEWTVDMPKDEDIETICLGQGWAA
CATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLIIIYHRGTGFDGDQCLGVQLMEL
GKKKKQILHGDPLSLTKKSYLVWVGFSAEGTPCYVDSEGTVRMLNRGFGNTWIPVCNTRE
HCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQME
EQYWRSVVFHNHVDYLSKNGYEFDENTKNQAVKEQQELLMKLFALSCKLEREFRCVELAD
LMTQNVVNLAIKYASRSRKLNLAQQLSEMAVEKASELATAPEDEEEEEDFRKHLNAGSSG
REWSRPLVRNVQQDQEMEDAEETACEEAEETPEVPKQRPNPFSKGVTSAEVTTPKSVVIA
SSSQGRVNPFKVTSNKKDPVVPAANVLDTMSRYSKKTSLSGSRAVNKQNPLVIKPLTPKP
KSKQASAASFFQIRTPNSSEKSTEEREEKAGNEPHEVTVAAQENTENRRPKTGFQMWLEE
NRANILTDNPDLNEAEVIKEGMSRFRMLSSEERMAWTEKAKGGAVNDLTDDKKRKRPTAD
EDEVKNNQEQNSEDSNLSKKPKPLDQSTNVRLSAFAFKQS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcacagaagccgatgcggtacggccacaccgagggacacaccgacgtctgc
ttcgatggcaccgggagctgcatcgtaacttgtggcagtgatggagatgtcaggatttgg
gaaaacctggatgacgatgatccaaagtccattaacgtgggagaaaaggcctattcctgc
gcgctaaagaatggaaggctgatcacagcagtatcgaacaacactgttcagatacacacg
ttccctgaaggagctccagatggcatcctgacccgtttcaccatgaatgcaaaccacgtc
accttcaacagcgacggtaccaaaattgctgccgggtctagtgactttatggtcaaagtc
gtggaggtggctgatagcagcaagcagaaaacattccgaggacacgatgctcctgtttta
agcctgtcttttgaccccagggatgtttacctggcatcggcgagctgtgatggttctgtc
agagtatggaaaatcgcagatcagacatgcacgacaagctggccgctgctgcagaaatgt
aacgacgtgataaacgcaaaatcaatctgcaggcttggctggcaacctggcagcgggaag
ttgctggcaattcctgtagacaaagttgttaaactgtacagaagagaaacctgggacagc
aaactggatctatcagacacgttcatcacacagcccttgaacattgtggcctggtctcct
tgtgggcagtacctggcagctggaagcgtggatgggagtattgtggtgtggaatgtggaa
acccaggagtgcatacagagaatgaagcatgagaaaaattacaccatttgtggcctggca
tggcaccccaaacacaggcaaattgcttatacggacactgaaggaaatctgggcttattg
gaaaacgtcagtgacggaaagaaaccaaatgacaaggtggccagtacagtgacaaaagat
tacaatgatctctttgatggagatgacgatgactatttaaatggagatatggtggaacca
cagtcttccccaaaggctggagctgatgaagatgatggtgatgatgatgaccttaggcca
actttgggccatctgagacgggcagtaattgatgatgatgacaactcagtagatattgga
atgataaaagctaatctgaatcttacggaaaaagaagatggtgatgatgaccagaccggt
ggctttccagctttgccactgtcatctacacaacagccattctatgatgggccaatgcca
acccccaagcaaaagccgttccagtcgggctccactcctgcgcatctcatgcatcggttc
atggtctggaattcggtcggcatcattcgctgttacaacgatgagcaagacaacgctata
gatatagaatttcacgacacctccatacatcacgcaacgcacctgccaaactctctgaac
cacacgatggctgatctctccacagaagctgttttactggcctgcgagagcacagaggaa
ctcgtcagcaagctccactgcattcactttagctcctgggatgcaaacaaggagtggaca
gtagatatgccgaaggacgaggacattgagaccatttgtctgggccaaggctgggctgct
tgtgccaccagtgccttgctggttcgtgtcttcacggttggaggagttcagaaagagatc
ttcagtctcccgggtccggtggtgtctatggcaggacacggagagcagttgatcattatt
tatcacagaggtactggctttgatggagaccaatgtctcggagtacagctgatggagcta
gggaaaaagaaaaagcaaattttgcatggagaccctctttctcttacaaagaaatcctat
ttggtgtgggtcggattctctgcagaaggtaccccttgttacgtagattctgagggaacc
gtgcggatgttgaaccgagggtttgggaacacttggattccggtgtgtaacacgagagag
cattgcaaaggaaaatcggatcattattgggtagttggcatccatgaaaaccctcagcag
ctcaggtgtattccttgcaaaggagcccggttccctcctacgctcccacgacccgctgta
gcaatattatcttttaaacttccttactgtcaagtgacgacagaaaagggacagatggag
gaacaatactggcgttctgttgtatttcacaaccacgtggattacttatcaaaaaatggc
tacgagtttgatgaaaatactaaaaatcaggcagtgaaagaacagcaagaacttttaatg
aaactatttgccctttcttgtaaactggagcgggaattccgttgtgtggaacttgctgac
ctcatgacgcagaacgttgtgaatttagcgatcaagtacgcgtctcgctctcgaaaactg
aatttagctcagcagctcagtgagatggctgtggagaaagcaagtgaattggcaacggca
ccggaagatgaagaggaggaagaggatttccgaaagcacttgaatgctggcagctctggc
agggagtggagtcggccactggtcagaaatgttcagcaggaccaagaaatggaagatgct
gaggaaactgcctgtgaggaagcagaagaaacacccgaagtacctaaacagaggccaaat
cctttctccaaaggtgtcacttcagcagaggtgacaactccgaagtctgttgtaattgca
tcaagcagccaaggacgagtgaatccctttaaggtgacatcaaacaaaaaggacccagtg
gtccccgcggcaaatgttctggacactatgagcagatactcaaagaaaacttctctgtct
ggcagtcgagctgtaaacaagcagaaccctcttgttataaagcctctgactcccaaaccc
aaatccaagcaggcttcagcagcctccttcttccagattcgtacaccgaactctagtgaa
aaatcaacagaagaaagagaagaaaaagcaggaaacgagccccatgaagtcacagttgct
gcacaggagaacaccgaaaacagaagaccgaagacaggattccagatgtggctagaagag
aacagagcaaacattttgacagataatcctgatctgaatgaagcagaagtaataaaagaa
ggtatgagtcggttcagaatgctgtcgtcagaagaaaggatggcgtggactgagaaagcc
aaaggaggagcagttaatgatttaacagatgataaaaagcgcaagcgtcccacagctgat
gaagacgaagtgaaaaacaaccaggagcaaaactcagaggactcaaatttatccaaaaaa
ccaaagcctttagatcaatccacaaatgtccgattgtcagcgtttgcgttcaagcaaagc
taa
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