Caloenas nicobarica (Nicobar pigeon): 135989371
Help
Entry
135989371 CDS
T11056
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135989371 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cnic01007
]
135989371 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135989371 (CARS1)
Enzymes [BR:
cnic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
135989371 (CARS1)
Amino acid related enzymes [BR:
cnic01007
]
Aminoacyl-tRNA synthetase
Class I (G)
135989371 (CARS1)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135989371 (CARS1)
Prokaryotic type
135989371 (CARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
tRNA-synt_1c
Senescence_reg
DUF2497
Motif
Other DBs
NCBI-GeneID:
135989371
NCBI-ProteinID:
XP_065492227
LinkDB
All DBs
Position
5:complement(52727857..52763165)
Genome browser
AA seq
829 aa
AA seq
DB search
MAAAAEQASSYSFILSISEEEARVKALNEYLSTRSYIQGFTFSHADVEVFRKFSGPPVDQ
YIHVVRWYRHIEAIYDGSNEKNEPCKLQTSKGKRVQPPWSPPEGTKHSRLCLYNSLTRNK
EIFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKYEIFYCMNITDID
DKIIKRARQNYLFERYRENKSAPDQLLEDVKTASELFSVKLNETTDPDKKQMLERTQNAV
KSAFDPLQEAVQAKFPAEEINRCHEILLEEARDLLSDWLDTKFGSQVTDNSIFSKLPKFW
EAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVKRIVENGYGYVSNGSVYFDTVKFDSSE
KHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKHSPNDFALWKSSKPGEPSWDSPWGR
GRPGWHIECSAMAGCILGESMDIHGGGFDLRFPHHDNELAQSEAYFENNHWVRYFLHTGH
LTIAGCKMSKSLKNFITIKDALKEHTARQLRLAFLMHSWKDTLDYSNNTMESAIQYEKFM
NEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFYDKKAAIHEALCDNIDTRSVLEEMR
SLVSQSNSYIAAKKSSRQMPNRLLLQNISSYLTQMLKIFGAIESDDTIGFPVGGSGQNIN
IESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPELGVRFEDHEGLPTVV
KFVDKDTLLKEREEKKKIEEEKKRKKEEAARKKQEQEAAKLAKMKIPPHEMFKSEHDKYS
MFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLHKEYLQMVQNGSAN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccgccgagcaggcttccagctacagttttattctgagcattagtgaagag
gaagccagggtgaaggctttgaacgagtacctgagcactcgtagttatatccaggggttc
acattttcacatgcagatgtggaggtattcagaaagttttcggggccacctgtggaccag
tatatccatgttgtccggtggtacagacacatagaagcaatctatgatggcagcaatgaa
aaaaatgagccttgtaaacttcaaacaagtaaaggcaagcgtgtgcagcctccctggtct
ccccctgaagggacaaaacattctaggctctgcctctacaacagcctgactcgcaataag
gaaatatttcagcctcagaatggaaaaaaggtcttgtggtattgctgtggtccaacagtt
tatgatgcttctcacatgggacatgccaggtcatacatctcatttgatatcctgagaaga
atattgagggattattttaaatatgaaattttctattgtatgaatattacagatattgat
gataagatcatcaagcgagcaagacaaaattacctttttgaacggtatagagagaacaaa
tcagcaccagatcagctacttgaagatgttaaaactgcctcagagctcttttcagttaaa
ttaaatgagacaacagacccagataaaaagcaaatgttggaaagaactcaaaatgcagtg
aagtctgcttttgaccctctacaagaagctgtgcaagcaaaattccctgcagaagagatc
aacagatgtcatgagatactgttggaagaagccagagatttgctgtctgactggctggat
acaaaatttggcagtcaggtgactgacaattccatattctcaaagctccccaaattctgg
gaagcagaatttcataaagatatggaagcgctcaatgttttacctccagatgttttaaca
cgggttagcgaatatgtgccagaaattgtggattttgtgaaaaggattgtggaaaatggt
tatgggtatgtgtccaatggatctgtatactttgatactgtgaagtttgattctagtgaa
aaacactcctatgctaagttggttcctgaagctgtaggggaccaaaaagctcttcaagag
ggtgaaggtgacctgagcatctcagctgatcgcttaagtgagaagcattctccaaatgat
tttgctttgtggaaatcctccaagccaggagagccctcatgggactctccgtggggaagg
ggtcgtccaggttggcacattgaatgttctgccatggctggatgcattctaggagagtcg
atggatattcatggaggagggtttgatctccggtttccccaccatgacaatgaactggca
cagtctgaggcatactttgaaaacaatcactgggttcggtattttctgcatactggccac
ttaacaattgctggctgtaaaatgtccaaatctttgaagaattttattaccataaaagat
gcactgaaggaacatacagcacgacagttacggttggctttcctcatgcactcttggaag
gatacactggattattcaaataataccatggagtcagctattcagtatgagaagtttatg
aatgagttctttttaaatgtgaaggatattcttcgagctcccactgatgtgacaggccag
tttcagaaatgggaaaatcaggaagcagagctgaacaagaatttttacgacaagaaggca
gcaattcatgaagcactgtgtgacaatattgacactcgctctgtcttagaagaaatgcgt
tcgttagtcagtcagagtaactcctatattgctgcaaagaaatcttccagacaaatgcca
aacagacttcttttacaaaacatcagttcctatctcactcaaatgctaaagatttttggt
gccatagaaagtgatgacacaattggttttcctgttggagggagcggtcaaaacataaat
attgaatctacagtgatgccatacctacaagttctttctgagttcagagaaggagtgcga
caaattgccagagagaagaaagtaactgaagttctgcagttgagtgatgctcttcgagat
gatatccttcctgaacttggtgttcgatttgaagatcatgaaggacttccaactgtggtt
aaattcgtggataaagacacgttattgaaagaaagagaagaaaagaaaaagattgaagaa
gagaaaaaaaggaagaaagaagaagcagccaggaaaaaacaagagcaggaagcagcaaaa
ctggcaaaaatgaagattccaccacatgaaatgtttaaatcagaacatgacaaatattcc
atgtttgatgaaaacggatttcccactcatgatacagaaggcaaagaactcagcaaagga
caaattaagaagctaaagaaactttatgaaacccaagaaaagctacacaaggaatatcta
caaatggttcagaatggaagtgcaaattga
DBGET
integrated database retrieval system
