Caloenas nicobarica (Nicobar pigeon): 135989380
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Entry
135989380 CDS
T11056
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03030
DNA replication
cnic03410
Base excision repair
cnic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135989380 (FEN1)
03410 Base excision repair
135989380 (FEN1)
03450 Non-homologous end-joining
135989380 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
135989380 (FEN1)
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135989380 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135989380 (FEN1)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
135989380 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
135989380 (FEN1)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
135989380 (FEN1)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135989380 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
5_3_exonuc_N
HHH_5
Motif
Other DBs
NCBI-GeneID:
135989380
NCBI-ProteinID:
XP_065492243
LinkDB
All DBs
Position
5:67327579..67330942
Genome browser
AA seq
382 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGET
TSHLMGMFYRTIRMVESGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQEAGEE
NNIEKYSKRLVKVTQQHTDECKKLLTLMGIPYLEAPGEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYCESIRG
IGPKRAVELIKEHKTIEKIVQQIDTKKYPLPENWLHKEAQKLFLEPDVVDPDAVELKWTE
PNEEELVQFMCGEKQFNEERIRNGVKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPET
KGSAKKKAKTSNAAAAKTKKGK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccatggcctggccaagctcattgccgatgtggcacccggggccatccgggag
aacgacatcaagtcttatttcggccgcaaggtcgccatcgacgcctccatgagcatctac
cagttcctgatcgctgtgcggcagggagccgaggtgctgcagaacgaggagggtgagacc
accagccacctgatgggcatgttctaccgcaccatccgcatggtggagagcggcatcaag
cctgtttacgtcttcgacggcaaaccgccccagctgaaatcgggggagctggcgaagcga
acggagcgtcgggctgaggctgagaaacacctgcaggaggctcaggaggctggagaggag
aacaacatcgagaagtacagcaagaggctggtcaaggtgacccagcaacacactgacgag
tgcaagaagctgctgacactgatggggatcccctacctggaggcgccgggggaggcagaa
gccagttgcgctgccctagtgaaggccgggaaggtttacgcggctgccacggaagacatg
gactgtctgaccttcggcagccccgtcctgatgcggcatctcacagccagcgagacgaag
aagctgcccatccaggaattccacctgaaccgcatcctgcaggacttgggcctgacctgg
gagcagttcgtggatctgtgcatcctcctgggctgtgactactgcgagagtatccgcggc
atcgggcccaagcgtgccgtggagctcatcaaggagcacaaaaccatcgagaagattgtc
cagcagatcgacaccaagaaataccctctgcccgagaactggctgcacaaagaggcccag
aagctctttctggagcccgacgtggttgaccccgacgccgtggagctgaagtggacggag
cccaacgaagaggagctcgtccagttcatgtgcggggagaaacagttcaacgaagagcgg
atccgcaacggggtgaagcggctgagcaagagccggcagggcagcacgcagggccgactc
gatgacttcttcaaggtgactggctccatcacttcagccaagcgcaaggagcccgagaca
aagggctcggccaagaagaaggccaagaccagcaacgctgcagccgccaagaccaaaaag
ggaaaataa
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