Caloenas nicobarica (Nicobar pigeon): 135989385
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Entry
135989385 CDS
T11056
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04620
Toll-like receptor signaling pathway
cnic04621
NOD-like receptor signaling pathway
cnic04622
RIG-I-like receptor signaling pathway
cnic04623
Cytosolic DNA-sensing pathway
cnic05164
Influenza A
cnic05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135989385 (IRF7)
04621 NOD-like receptor signaling pathway
135989385 (IRF7)
04622 RIG-I-like receptor signaling pathway
135989385 (IRF7)
04623 Cytosolic DNA-sensing pathway
135989385 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135989385 (IRF7)
05168 Herpes simplex virus 1 infection
135989385 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135989385 (IRF7)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135989385 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
PHTF1-2_N
Motif
Other DBs
NCBI-GeneID:
135989385
NCBI-ProteinID:
XP_065492256
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All DBs
Position
5:complement(49415102..49418773)
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AA seq
523 aa
AA seq
DB search
MAAPQSEGEAQKLRFGPWLVSAVSSGRYRGLRWIDPAHSAFRIPWKHNARKDVTSSDLEV
FKAWAKASGRYEDPEDPAKWKTNFRCALTSTRMFVLLEDHSKCGDDPHKVYAIAPATRCQ
GEEGDFGSPDPVVDQQVQLELNTQDMAPEIAPPGSTDPTQSSMMEDLEWVLKQCDISSHN
VGPPNPSWVPSGETGPVCRVGDAMGGRPQSLPNRDFSAGEVPHQDTLLQPHPDPRQNNCI
APPTFQQWVPVAEQPLLGTYSLPGPMLLGEQGAMPPPCHIPEVTVPVLSPGEVMLFTSTA
PPPLEDNTDGIIPNLDVSIYYRGKLFHQEEVVNSQCLLVYQPFDPAVAGCPGHLVRFPSP
ADLADSKQRHYTEELLGSAGLQLEQRACKLFATRLKKCKVFWALSQQLEGIEDPSPNLLC
RGQETPIFDFNEFCTGLRDFRNRQRKRSPDFTIYLCFGQSFSKAKPKESKLILVKLVPKF
CEYWHEQVLREGASSLDSGTISLQLSDSFSLFELIEQYNMQMD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccgcagagcgaaggggaggcccagaagctgcggttcgggccctggctggtg
agcgccgtcagcagcgggcggtaccggggactgcgctggatcgatccggcccacagcgcc
ttccgtatcccctggaagcacaatgccaggaaagatgtcaccagcagcgacctggaggtc
ttcaaggcctgggcaaaggcgagtggtcggtatgaggacccagaagaccccgccaagtgg
aagaccaacttccgctgtgccctgacgagcacccgcatgtttgtgctgctggaggaccac
tccaagtgtggtgatgacccacacaaggtctatgccatcgccccagccacccgctgtcaa
ggcgaggagggagattttggcagccctgaccctgtggtggaccagcaggtgcagctggag
ctcaacacccaagacatggctccagaaatcgcccccccaggcagcactgaccccacacag
tcctcaatgatggaggacctggagtgggtgctgaagcagtgcgacatctcctcccacaac
gtgggccccccgaacccatcctgggtgccttcaggtgagactggccctgtttgcagggtg
ggtgatgctatgggtgggagaccccagtcccttcccaacagggatttctctgcaggggaa
gtcccccaccaggacaccctgctccagcctcacccagaccccagacaaaacaactgcatt
gccccaccaacatttcagcaatgggtgcccgtggcagagcagcctctcttgggcacctac
agcctcccaggccccatgttgctgggggagcaaggggccatgccaccgccatgtcacatt
ccagaggtcacggtccctgtgctgtccccaggggaggtgatgctcttcacctccactgca
ccgccgccactggaggataacacagatggtatcatccccaacctggatgtcagcatctac
taccgggggaagctcttccaccaggaggaggtggtgaacagccagtgcctgctggtgtac
cagcccttcgacccagcggtggccgggtgccccgggcacctggtgcgctttcccagcccc
gccgatctggctgacagcaagcagcggcattacactgaggagttgctgggcagcgcggga
ctgcagctggagcaacgtgcttgtaagctctttgccacgcgcctgaagaagtgcaaagtc
ttctgggcgctgtcccagcagctcgagggcatagaggacccctcacccaacctgctctgc
cggggccaggaaacccccatctttgatttcaatgagttttgcacagggctgagggacttc
cgcaacagacaaaggaagcggtcccctgacttcaccatctacctctgctttgggcagtcc
ttctccaaggccaagcccaaggagtccaagctcatcttggtcaagctggtgcccaagttc
tgcgagtactggcatgagcaggtgctgcgggagggagcctcctccctcgacagtggcacc
atcagcctgcagctctctgactccttcagcctcttcgagctcatcgagcagtacaacatg
cagatggactga
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