Caloenas nicobarica (Nicobar pigeon): 135989411
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Entry
135989411 CDS
T11056
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03015
mRNA surveillance pathway
cnic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135989411 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135989411 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135989411 (CPSF7)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135989411 (CPSF7)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
135989411
NCBI-ProteinID:
XP_065492303
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Position
5:complement(67130029..67138420)
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AA seq
460 aa
AA seq
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MSEGVDLIDIYAEEEFNQDSEFSNADQMDLYDDVLAASSQLPENRTGSSEPPTEIRQETS
PKANNKAPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQTIRSVGVYDVVELKFAENRV
NGQSKGYAEVVVASENSVHKLLELLPGKILNGEKVEVRLATRQNLSQFEAQARKRVPPRA
HSRDSVDSVDGCAVPTGNALPPARLEKPRSVLPFFSRPPAALPLMGLPPPPMPPPPPLSS
SFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAVPPALHLNPAFFPPPNTTLAPPPDTY
GKAMAPYNHSSRELSLPPPPASDLEFEEIMNRNRAISSSAISKAVSGASEGDYSDAIETL
LTAIAVIKQSRVASDERCRVLLSSLKDCLHGIEAKSYSTGSSSSRKRHRSRERSPSRSRE
SSRRHRDLLHSDDRHEDYFPERNREHERHRDRDRERDRHH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggggtggatctgatcgacatctacgctgaggaggagttcaaccaggattcg
gagttcagtaatgctgaccagatggatctgtacgacgacgtgttagccgccagctcacag
ctccctgaaaaccgtaccggcagctcggagccccccacagagatccgccaagaaacctct
cccaaagccaacaacaaagctcccgccatcctgtacacgtacagcgggctgcgcaacaag
agagccgccgtctacgtgggcagcttctcctggtggacgacggaccagcagctgatccag
accatccgctcggtcggcgtctacgatgtggtggagctgaaattcgcagagaaccgagtg
aatggccagtccaaagggtacgcggaggtggtggtcgcctcggagaactcggtccacaaa
ctcttggagcttttacccggcaaaatcctgaatggggagaaggtggaggtgaggctggcg
acccggcagaacctctcacagttcgaggcgcaggctcgcaaacgtgtgccgccgcgggcc
cactcccgggactcagtggattcggtggacggctgcgccgtgcccacggggaacgctttg
ccacccgcccgcctggagaaaccccgctccgtcctgcccttcttcagccgcccccccgcc
gccctccccctcatggggctccccccgccacccatgccgcctccgcccccgctttcctcc
agttttggcgtccccccaccccccccgggcatccactaccagcatctcatgcccccgcca
ccccggctgcccccgcatttggctgtgcccccgccgggggctgtgcccccagccctgcac
ctcaatcccgccttcttcccccccccaaacacgacgctggctcctccaccggacacctac
ggcaaagccatggccccctacaaccacagcagccgggagctcagcctgccccctccccct
gcgagcgacttggagtttgaggagatcatgaacaggaaccgggcgatttccagcagcgcc
atctccaaggcagtgtccggtgccagtgaaggcgattacagcgacgccattgagaccctc
ctgacggccatcgccgtcatcaaacagtcccgtgtcgccagcgacgagcggtgccgcgtc
ctcctctcgtccctcaaggactgtctgcacggcattgaggccaagtcctacagcaccggc
agcagctcctcccggaaaagacaccgatctcgggagcgctctcccagccggtcgcgcgag
agcagccggcggcaccgggatttgctccacagtgacgatcggcacgaggattatttccca
gagcggaaccgagagcacgagcgacatcgtgacagggacagagagagggaccggcaccac
tga
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