Caloenas nicobarica (Nicobar pigeon): 135989431
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Entry
135989431 CDS
T11056
Symbol
ARID4A
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135989431 (ARID4A)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135989431 (ARID4A)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
ARID
135989431 (ARID4A)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
135989431 (ARID4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
PWWP
Tudor_2
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
135989431
NCBI-ProteinID:
XP_065492324
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All DBs
Position
5:4532529..4581999
Genome browser
AA seq
1300 aa
AA seq
DB search
MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVVLKGDNSTQLVQDDQVKGPL
RVGAMVETKMPDGSFQEAVISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKSNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVS
VTCNSEKADWYPALVVSPSCNDDVTVKKDQCLVRSFADSKFYSVARKDIKELDVQNLPKS
ESSPKKGLQEASAFLSTKGVPRNWKMDISEILESSSSDEEGGTAAETDEEEEKREEKTEE
VAPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVFQQGGCDNIE
SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTIHHNEPKVVED
VQKHMEPMEESVKEEQKIPPTEVKKEAEENFSSSESEKEEIELRSPRGRRRLARDTTPAK
KDGDEDKTQDKLKDSNKENKDIEETPENTEKKENETPLGRKSTPKQKEKKIKKQEDSDKE
SDEEEERQREREEIENKGESEGEEDEEDAEPCLTGTKVKVKYGRGKTQKIYEASIKSTEI
DDGEVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGPKRKQKKKTKNKEDSEKDEKKDEEK
QKSKRGRPPLKSTLPSNTSCGLSKTLNSEGKSGARSARINLSDSSPLPNGTEATPRRQTR
RSSGMFDSDRGSNDSGSSDSEADESSEKNLNEEFSPESSELEKSEKLHDEKLDEENPKIP
HALKENDRTQVQPLETLKLEVEDNEQIVQIFGNKMEQIEEIRREAEKSPKGKGRRSKTKD
PSLENAKISPGSQEEVANESLTEPERLDVSSLDCKEISSTTESETEPSAKDKKFLKRKTL
EQASPEKRNRRESEMEVPNIVAEERTSECTGAEECRGLNTEESLRTEHEEMPSLVAESVQ
HGQELRNETFERPSEERENVPLKDEDDAMPQIGPETLLCHEVDLDDLDEKEKSSNEDTIS
EKPDLSASNSNPSALPPVVPSSFSVASPLTLSQDESRSIKSESDLTIEVDSVAEESQEGL
CESESANGFEASTTSSNCSIAVQEREIGEKGQKRPSDSNSGTLAKKQKRTPKRTSAAAKN
EKNGTGQSSDSEDLPVLDSSSKCTPVKHINASKPQKISRSPARVISPHIKDGEKDKHREK
HHHQNASPRVYKWSFQLNELDNMTSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKRL
KKKDREVSHTGASMSSASSDTGMSPSSSSPPQNVLAVECR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcagatgagcctgcctacctgacagtgggaactgatgtcagtgccaagtac
cgtggtgccttctgtgaggcaaagattaagacagtgaagaggcttgtgaaagtcaaggtg
gtcctgaagggggataactcaactcagttagtacaagatgaccaagtcaaaggacctcta
agagttggtgcaatggttgaaaccaaaatgcccgatggatcctttcaagaagctgttatc
agcaagttgacagatgctagttggtatactgtagtttttgatgatggtgatgaaaggacc
ttgagacgaacttcattatgcttgaagggagaaaggcacttcgcagaaagtgagacactt
gatcagctgccactaaccaacccagagcactttggaactccagttattgggaagaaatct
aatagaggaagaagatcttcccttcctgttactgaagatgaaaaggaagaggaaagtagt
gaagaggaggatgaagataaaaggcgtctcaatgatgaattgcttggcaaggttgtgagt
gtgacctgtaactctgagaaggcagactggtacccagctttggttgtgtctcccagctgt
aatgatgacgtcacagtgaaaaaggaccagtgtttagttcgatcctttgcagattccaaa
ttttactcagtagcaagaaaagacattaaagaactagatgttcaaaacttaccaaaatct
gagtcctctcctaaaaaagggctccaggaggcgagcgcgtttctcagcacaaagggtgtt
cctcggaactggaaaatggacatcagtgaaattctggagtcctccagcagcgatgaggaa
ggtggaactgctgcagaaactgatgaagaggaagaaaagagagaagagaaaacagaagaa
gtagcgcctgaggaagagcttgatcctgaagagagggacaacttcctccaacagctttac
aagtttatggaagacagaggtactcctatcaataaaccacctgttctgggctacaaggac
ctcaatctcttcaaactttttcgactggtatttcagcagggtgggtgtgacaatattgag
agtggtgctgtatggaagcaaatttatatggaccttggcattcctattttgaactcggct
gcttcctacaatgtaaaaaccgcttatagaaagtatctttatggttttgaagagtactgc
cgttctgcaaacattcagtttaggaccatccatcacaatgaaccaaaagtagtagaagac
gtacagaaacacatggaaccaatggaggaaagtgtgaaagaggaacaaaaaataccccca
acggaagttaaaaaagaagcagaagaaaatttttccagcagtgaaagtgaaaaagaagaa
atagagctaagatccccaaggggacgaagacgacttgcccgagacacaacccctgctaaa
aaagatggtgacgaggataaaacacaagacaagttaaaagacagtaacaaagaaaacaaa
gatatagaggaaacacctgagaacacagaaaagaaagaaaatgaaactccactagggaga
aaaagtacaccaaagcaaaaagagaaaaaaatcaaaaaacaggaggattctgataaagag
tcagacgaggaagaagagaggcagagggagagggaggaaattgagaacaaaggagaatcg
gaaggtgaagaggatgaggaggatgcagaaccctgcctgaccggaaccaaagttaaagta
aaatatggacgtggaaagactcaaaaaatttatgaagccagtattaaaagcacagaaatt
gatgatggagaagttttatatttagttcactactacggttggaatgtaaggtatgatgaa
tgggtgaaagctgatcggattatctggcctgtggacaaaggaggaccaaaaagaaaacag
aagaaaaaaacaaaaaataaagaagacagtgaaaaggatgagaagaaggatgaggagaaa
caaaaatccaagcgtgggcgaccgcctctgaaatccactcttccatcaaacacctcttgt
ggtttatccaaaacgctgaatagcgaaggtaaatcaggagccaggagtgcacggatcaac
ttgtcagattcctcaccgttaccaaacggaacagaagcaacacctcgcaggcagacgaga
cgtagctcaggaatgtttgattctgatagaggatcaaacgactctggctcatctgacagt
gaagcagatgagtcatctgaaaagaatttgaatgaagaattttctccagaaagttcagaa
ctggaaaaaagtgaaaaattacatgatgagaagctagatgaagaaaacccaaagattcct
cacgcattgaaagaaaatgacaggacgcaagtacagccgttagaaacactgaaactggaa
gttgaagacaatgaacaaattgttcagatttttggaaataaaatggaacaaatagaagaa
atcagaagagaagctgaaaaatcacctaaaggaaaagggaggaggagcaagacaaaagat
ccctctttagagaatgcaaagatctcaccagggagccaagaagaagtggccaatgaatct
cttacagaacctgagagattagatgtgtcttccttggactgtaaagaaatttccagcact
actgaaagtgaaacagaaccttctgcaaaagataagaagtttttgaaaaggaaaacttta
gaacaggcgtcgcctgagaagcgaaatcgccgcgagagtgagatggaagtgccaaatatt
gtagctgaggagaggaccagtgaatgtaccggagcagaggaatgtcgagggctgaacact
gaggagtccctcagaactgaacacgaggaaatgccgtccttggtggcagaatcggttcag
cacggtcaagaactgaggaatgagaccttcgaacgtccgtctgaagaacgtgagaatgtt
cccttaaaagatgaagatgacgcgatgccgcagatcggtcctgaaactttgctctgccat
gaagtagacctggatgacttggacgaaaaggagaagagcagtaatgaagacacaatatca
gaaaagcccgaccttagtgcttcaaattcaaatccatccgccttaccccccgtcgtcccg
tcaagcttttctgtggcctcacctcttactctcagccaggatgagtcgcgcagtatcaag
agcgagagcgaccttactattgaagtagacagcgtggccgaagagtctcaagaaggtctc
tgcgaaagtgagtctgccaatggattcgaggccagtacgacgtcaagcaattgtagcata
gccgtgcaagagagagagatcggggagaaaggtcaaaaaagacccagtgatagcaatagt
ggaacactggcaaaaaagcaaaagcgtactccaaagcgaacaagtgctgcagccaaaaat
gagaagaatggaacaggacaaagtagtgacagtgaagaccttccagtcctggacagttcc
agtaaatgtactcctgtcaaacacataaacgcatccaaaccccagaagatttctcgatcg
cctgcaagggtgatttcacctcacatcaaagacggagagaaggacaaacacagagagaaa
caccaccaccagaatgcgtcgcctcgagtatacaaatggagttttcagctcaatgaacta
gacaatatgaccagcacggaaaggatttccttcttacaagaaaaactacaggaaataaga
aaatactacatgtccttgaagtcagaagtagcaaccatagacaggagaagaaaacgatta
aaaaagaaagacagagaagtgtcacatacaggagcgtccatgtcatctgcttcatcggac
actggaatgagcccttcgtcgtcttctcctccgcaaaacgtgctcgctgtcgaatgcagg
tga
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