Caloenas nicobarica (Nicobar pigeon): 135989551
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Entry
135989551 CDS
T11056
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135989551 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135989551 (LRRC4C)
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
NGL family
135989551 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
135989551
NCBI-ProteinID:
XP_065492532
LinkDB
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Position
5:45662681..45664611
Genome browser
AA seq
638 aa
AA seq
DB search
MLNKMILHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPLESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgatcttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtttgctcctgcagcaaccagttcagtaaagtg
atttgcgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaaacatctgagg
cacctagaaatcctgcagctcagtaggaatcacatcagaacaattgaaataggggctttc
aatggtctagccaacctcaacactttggagctctttgacaatcgtctgaccactatccca
aatggggcttttgtatatctgtcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatctgggg
gaactgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattccaaacctcaccccacttgtaaaa
ctggatgagttagatctttctgggaatcacttgactgccatacggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagatccaagtgatagaaagg
aatgcttttgataaccttcagtcacttgtagagatcaatctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaacactgcatgctgtgcccgttgccacacacctcccagtttaaagggaaggtacatt
ggtgagctggacctgaattacttcacgtgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggcagcagagatgaaatgccgagcatcaacctccttg
acctccgtgtcttggattactccaaatggatctgttatgacacatggggcatatagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtaactgtgcaagacaca
ggtttgtatacatgcatggttagtaactctgttggtaataccacagcttctgccacactg
aatgtgactgccttggataaccctggttacacgtacttttcaactgtcacagtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacaccagttacc
aactgggagaccactaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacggacgcaaataatgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacctttagag
agtcacttgcccatgccagcaatagagcatgagcacctaaatcactacaactcttataag
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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