Caloenas nicobarica (Nicobar pigeon): 135989638
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Entry
135989638 CDS
T11056
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135989638 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135989638 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
PDZ domain-containing proteins
MAGUK family proteins
135989638 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
135989638
NCBI-ProteinID:
XP_065492679
LinkDB
All DBs
Position
5:35339794..35398699
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AA seq
675 aa
AA seq
DB search
MTTSHMNGHITEDSDSEAKNVDLASPEESQKHREMAVDCPGDLGSRMMPMRRSAQLERIR
QQQEDMRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYTVK
TVEVEELLTSLKHIQHVLVDPQSQEDISLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQCVLKPSHHKDGQELNALLNAPHMQALLLAHDKVAEQEMQPEPVTDE
KIYENVGVYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEADRFASAVPHTTRSRRETEVAGRDYHFISRQAFESDI
AAGKFIEYGEFEKNLYGTSTDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFVAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcacatgaatggacacatcacagaagattctgacagtgaagcaaaaaat
gtggatcttgcatctcctgaggaatctcagaagcacagagaaatggctgttgattgccct
ggggatttgggctccaggatgatgcccatgcggcggagcgctcaacttgagcgaatccgc
cagcagcaggaggacatgaggcgcagacgggaagaagagggaaagaaacaagaactggac
cttactgcttccatgaggctaaagaaactggcacaaattcctcctaaaactggaatagat
aatccaatatttgatacagaagaaggaattgtgttggagagtcctcattatactgtgaag
acagtagaagtggaagaactgttaacttctcttaagcatatccagcacgttttggtagac
cctcagagccaggaggatatctctctcattttacagcttgttcaaaatactgattttcag
aatgcatttaagatacacaatgctgttacagtgcacatgaacaaagccagccctccatat
cctctcatctccaatgcacaagaactagcacaagaggtacagtgtgttttgaaacccagc
caccataaggatgggcaggagctgaatgctttgctgaatgcccctcacatgcaggcactt
ttactggctcatgataaggttgcagaacaagaaatgcaaccagagcctgtgacagatgaa
aaaatttatgaaaatgttggtgtgtatggaggggagacggttaaaatagtccgtattgag
aaagctcgggatattccattgggtgctactgttcgcaatgaaatggattctgttatcatt
agtcgaatagtgaaaggaggtgctgcagagaagagtgggctgttacatgaaggggatgaa
gttctggagattaatggcattgagattcgtggaaaagatgttaatgaagtttttgacttg
ttggctgacatgcacggtacactgaccttcgtattgattcccagtcagcagagcaagcca
cctcctgcaaaggagacagttatacatgtgaaagcacattttgactatgacccctctgac
gacccttatgtcccctgccgagagttaggcctgtcttttcaaaaaggagatatactccat
gtgatcagccaagaagatccaaactggtggcaggcttacagggatggagatgaagataat
cagccattggcaggccttatccctggaaaaagtttccagcagcaaagagaagcaatgaag
caaaccatagaggaagacaaggagccagaaaaatcaggaaaactgtggtgcgcaaagaaa
aacaaaaagaaacggaaaaaggttttatacaatgcaaataaaaatgatgattatgacaat
gaggaaattttgacgtacgaggaaatgtcactgtatcatcaaccagcaaataggaaacga
cctattgttctgatcggcccacagaactgcggccaaaatgaattgcggcagagacttatg
aataacgaagcggatcgttttgcctctgcagttccccatactactcggagcaggcgagag
actgaagtagctggcagggattaccatttcatttcccgacaggcatttgagagtgacata
gctgcagggaagttcattgaatatggagagtttgaaaagaacctctatggtactagtaca
gactccgtgcggcaagtgatcaactctggcaagatatgcctcttaaatcttcatacccag
tcactcaagacactacgtaattctgacttgaagccatatattatatttgttgcaccacct
tcacaagagagattacgtgctttattagccaaagaagggaaaaacccaaagccagaagag
ctgagagaaatcatagagaagacaagggagatggaacagaacaatggccactactttgat
acagcaattgtgaattctgatcttgataaggcatatcaagagttacttcggttaataaac
aaactcgacacagaaccccagtgggtgccgtctacctggctacgatga
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