Caloenas nicobarica (Nicobar pigeon): 135989805
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Entry
135989805 CDS
T11056
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135989805 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
135989805 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_9
TPR_17
TPR_16
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_12
ARM_TT21_N
ANAPC3
TPR_Slam
TPR_20
FAT
ChAPs
ARM_TT21
MAS20
COPI_C
Motif
Other DBs
NCBI-GeneID:
135989805
NCBI-ProteinID:
XP_065492938
LinkDB
All DBs
Position
5:complement(25648489..25710970)
Genome browser
AA seq
1754 aa
AA seq
DB search
MTQRNKSVEEDSADKSRRSGSEKVHRENTTCSNESRVVKLPVIASFAGTTKKIVMVEHPA
RPHKPSYCMSNFHANSSPISLEKTKGVIKVKDRVHMLQMDPQNLKKDKTEETDTMIKDGD
GFSSTGTDTSENISRKGKITGESCKKRSRVISKANQQDLDFELGRVPRRGSKQPSVRSAQ
ERLEEARDVTRPDTSKIYKNFQQSKPEEPTSTPALPVKVVARSIDEIIASLQSTSPSPSD
QTIKALLEGVLGQNYNIKMEKESQAAENESWPKDELLTHDKQVKQALSLDVLRVEGKAIS
KIKPDEVQKEIQEEHDLQQSLPPQASNVKGQDYPGIHHLCTAFPGFILPPYLQLVSRIYH
TFDRRGHNILLTAEDADNKEEGPTCSKYMNLKEQAEKKRIFYEGIPISEQFQNNRTDGIH
FLPPHTSKSLTECQKVMEYCLKKPQLELLAEKSSTIEDIVSEDFFTDYEEEKEDLEAEQD
VNDFYDYKLTKSLLRRCQSLPDFSDSESSETGLIKRSVSALEMSAFKDEIMLNISANFKT
SMKELEVMKQWMAELEVEREIGKSSPTKHLFNEICDDPQSMQTDIPVEKMTTLSGQEDSE
NDIVLVEQPQKAGIKCTVSPRRKKTKKSKKIINPRKLEAVIKKLSQPPKILKRSVSLGRL
PVHDQFSIKVSSAIKQYQSLSVPCLLDFEKFAEVRGGIPKETCVRVWVSGIWNHWLHETF
PSHGTAELLKRTESVDSQESNLQIKLIDSIQPVLLEGATVSIEDLEKEITRLTELIEKEE
NPSAFHYCRRGAIQRKLGKLKSAMDDLEKAISLEPLLLDAYWHRHLIYLFQDRISAALND
LNFITKWSKNKADTYLSMAEIYRKQGNNALAIISYNSAIQCSPTDDDIYFRRAELYFEEN
QLLLAMDDYAKCFQYNPKRIDALMRHGIHFFDCSVFMKAIQDFTAVIKEDPTNAQARLYR
GRAYFKQHQYRNAIQDLAAAVHLDPSCWLAFYYRGCILRQTDPKKALQDFSVSVLINDTK
ENIYSFLHRGIVYSEQCEWSLAICDFESVLALDSSVIFAYLNTGLILLLHLDQYYEAIQQ
FTNVIEIDPLNVRAYVCRAQAYHKNHDLLNAVKDINRAIHLYPDKSQLYIIRGQYLVELK
KDELASLCIQQFAEMDEEYFMSQPVQQALIQSFCQNHDKAIECLYEATAIKPEPSPLVIL
GKIQMKANKTKDAVRSFKKAVNLLMSSAKILPKTFETAEIYYLTGVCYMEQKSLLRARDA
FSMAIKLHSRYPDAFYQRGLCRMQLRKAKCIQDFSRALALCPSHFQAYMALATYYGSQGR
YFQAILNCSEAIKIIPNSVQAYFYRGILKCQNKTFKAAIEDLSEVIDLNATCVLAYYNRA
VCYHQIKDFRKALKDYGIILLLELSEEIAFKVLINRGLLYMELGDYANACEDFKEATLLS
PDDSQIFQALGICYYRIHEFEDAVRSFDQVLKLDHVSVDAYIGRGNSYMENGDEAGCKQA
QKDFLRAIHLNPKCIKARVCLAYNLQVLGKFQRAWNQFTVAIFMDPKCLAAYDGRASVCL
QMGETFAAFLDTNAALKLATTAPLLTNRGFINHLMGHLTCAMKDYQQAISVDPNYALAYF
NAANIYFQNRQFSQAYCYYSKVLQLDPRNESAIMNRAVTNTLLNNTEEAKEDFEKAICLC
PFSAAVYFNRANFYNGLKQYELAEKDISTALSIQPNDALMYKFRADIRGKLGFNKEAVED
YKQAISIQDQIYSM
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaagaaataaatctgtggaagaagacagtgctgacaaaagtcggagaagtggc
tctgaaaaagttcacagagaaaataccacttgtagtaatgaaagtagagttgtaaaactg
ccggtaattgcctcatttgcaggtaccactaaaaaaattgtaatggtcgagcacccagca
cgtcctcacaagccaagttactgcatgtctaattttcatgctaatagctcccctatctca
ttagaaaagacaaaaggtgttattaaagtaaaggatagagtgcatatgctacagatggat
cctcagaatttaaaaaaagacaaaactgaagaaacagatactatgattaaagatggtgat
ggatttagctctacaggtactgatacaagtgaaaacatttcaagaaagggaaaaataact
ggggaaagctgtaagaagagaagtagagtgatttcaaaagcaaatcagcaagatttagac
tttgaattgggaagagtgccgagacgaggaagcaagcagccaagtgtgaggtctgctcaa
gaacggctggaagaggcaagagatgtgactagaccagacacttcaaaaatatacaagaac
ttccagcagagcaaaccagaagagcctacttccacaccagcattgcctgtgaaagtggtt
gcaaggtctattgatgaaataattgcttccctgcagtctacttctccatctccctcagac
cagacgatcaaagcactcctggagggtgttcttggccagaactacaatataaaaatggaa
aaagaatctcaagcggcagaaaatgaatcttggcctaaagatgagctgttaacacatgat
aaacaggtgaagcaggctttgtccttggatgtgctacgggtggaaggaaaagcaatatca
aaaattaagccagatgaagttcagaaggagatacaagaggaacatgacttgcaacagtct
ttgcctcctcaggcttcaaatgtcaaaggtcaagattatccaggcattcatcacctatgt
actgcttttcctggttttatattgcctccttatttacaactggtttctagaatttatcat
actttcgacagaagaggtcacaatatcttacttacagcagaggacgcggacaataaggag
gaaggaccaacgtgttccaaatatatgaatttgaaagagcaagctgaaaagaaaagaatt
ttttatgaaggaattcctatttcagagcaattccagaataatcggacagatgggattcac
tttcttcctcctcatacatcaaaaagtctgactgaatgccaaaaagtaatggaatactgt
cttaaaaagccacaattggaactattagcagagaaaagcagtactattgaggatattgta
tctgaggactttttcactgattatgaagaagaaaaagaagatttagaagctgagcaagat
gttaacgatttctatgattataaactgacaaaaagtttactgagaagatgccaatccttg
cctgatttttctgacagtgagagctcagagacaggtttgattaaaagatcagtctcagct
ctggagatgtctgctttcaaagatgaaattatgttaaatatatcagctaatttcaaaacc
agcatgaaagagttggaggttatgaagcaatggatggctgagctagaggttgagagagag
atcgggaaaagctcccctaccaagcatctattcaatgaaatctgtgatgatcctcagtca
atgcagacagacataccagtagaaaaaatgactacattgagtggacaagaggatagtgag
aatgacattgttcttgtggagcaacctcaaaaggctgggattaaatgtactgtttcccca
agaagaaagaaaacaaagaaatcaaagaaaataataaaccctagaaaattagaagctgtg
attaagaaattaagtcagcctccaaagattcttaaaaggtctgtgtctctgggaaggctt
cctgttcatgatcagttcagtatcaaggtgtcttcagcaatcaaacaatatcagagcctc
agtgtcccttgtttgttagattttgaaaagtttgcagaagtgaggggtggaattccaaaa
gaaacttgtgttcgcgtgtgggtcagtggaatatggaaccactggcttcatgaaactttc
ccttctcatgggactgcagaattactaaaacgaactgagtcagtggactctcaagaatca
aatctacaaataaaactaattgactcaatacagcctgttcttcttgaaggtgcaacagtt
agtattgaagatttagaaaaagaaataacaagattgactgagctaatagaaaaggaagag
aatccttcagcttttcattactgcagacgcggagcaatacaaagaaagttagggaagtta
aagtcagctatggatgacttggaaaaagctataagcttagaaccactactacttgatgct
tactggcatagacatttgatttacctctttcaagacaggatttctgctgctttaaatgac
ctgaattttataactaaatggagcaaaaataaagcagatacatacctgtcaatggctgaa
atttacaggaaacagggtaataatgccttggcaatcatcagttataactctgcaatacag
tgcagccctacagatgatgacatttattttagacgagctgagttgtattttgaggaaaat
caattgttattggccatggatgattatgccaaatgttttcagtataacccaaaaagaata
gatgcgcttatgagacatggaatacatttctttgactgttcagtttttatgaaagcaatt
caggattttacagctgtgatcaaggaagaccccaccaatgctcaggcaaggctgtatcga
ggaagagcatattttaagcagcaccagtatagaaatgcaatacaagacttagcagcagcg
gttcatctagacccttcttgttggttagcattctactatagaggttgcatattacgacag
accgatccaaaaaaggctctgcaggacttcagtgtttctgtactcatcaatgacactaag
gaaaatatctattcttttcttcatcgtggcatcgtttactcagaacagtgtgagtggtca
cttgcaatctgtgactttgaaagtgtcctcgctttggacagctctgtaatctttgcttac
ctaaatactggtttgatactgctgttgcatcttgatcaatactatgaagctattcaacag
tttactaatgtcattgaaattgatcctctcaatgttcgagcctatgtatgtagagcgcaa
gcatatcataagaatcatgatttactaaatgctgtgaaggacataaaccgagccattcat
ctttatccggataaatcacaactttacataataaggggacagtatttagtggagttgaag
aaagatgagctggcaagtttatgtattcaacaatttgcagaaatggatgaagaatacttt
atgtctcagcctgttcagcaagcactcattcagtcattttgtcaaaatcacgataaggcc
atagagtgcttatatgaagctactgcaattaagcctgagccttcaccgttggttatttta
ggaaaaatacaaatgaaagccaacaaaactaaggatgctgtgagaagttttaaaaaagct
gtgaatctcctgatgagttcagcaaaaatcctgcctaaaacatttgaaactgcagaaata
tattatctcacaggcgtgtgttacatggagcaaaaaagtttattaagggcccgtgatgct
tttagtatggctatcaaactacattcacgttaccctgatgcgttttatcagcgagggctg
tgtagaatgcagctcagaaaagctaagtgcatccaagatttcagtcgagcacttgccctt
tgtccatcacatttccaggcatacatggctcttgctacttactatggaagtcaaggtaga
tactttcaggcaattctgaattgcagtgaggcgatcaaaattattcctaacagtgtgcaa
gcttatttttaccgaggaattctaaagtgtcaaaataagacatttaaagctgcaattgaa
gatctttcagaagttattgacctcaacgcaacctgcgttttggcgtattataacagagct
gtctgttatcatcaaataaaggacttcagaaaggctttgaaagattatggaattattctt
ctgcttgaattgagtgaggaaatagcttttaaagtgttaattaatcgtggactactctac
atggaacttggtgattatgctaatgcatgtgaggactttaaagaagcaacattgcttagt
ccagatgacagccagatctttcaagctcttggaatctgctactatagaattcatgagttt
gaagacgctgtaagatcatttgaccaggttctcaaactagatcatgtttctgtggatgcc
tacattggacgaggaaattcatacatggaaaatggagatgaggctggttgtaaacaagca
caaaaagatttcttgagagcaattcacttgaatccaaagtgcataaaagccagagtttgc
ttagcatacaacttgcaggtccttggaaagtttcagagagcttggaaccaatttacagtt
gccattttcatggatccaaaatgccttgctgcatatgatggacgagcttcagtctgtctt
caaatgggtgaaacttttgctgcatttctagatacaaatgctgcattaaagcttgctacc
actgctccgctgctaacaaatcggggtttcatcaatcatttaatgggacatctaacctgt
gccatgaaggactatcaacaagcgatttctgttgaccccaactatgcattagcctatttt
aatgcagcaaacatctacttccagaatcgacagttttcacaggcctattgctattattcc
aaggtattacaacttgacccaagaaatgaatctgctattatgaatcgtgctgttacaaat
acattactaaacaatactgaagaagcaaaagaagactttgagaaggcaatttgtctgtgc
ccattctctgcagcagtgtattttaacagggccaatttctataatggattaaagcaatat
gaactagctgagaaagacatttcaacagcattgtcaattcagcctaatgatgccttgatg
tataaatttagagctgatattcgtggtaaattgggtttcaataaagaggctgtagaagac
tacaaacaagcaatcagcattcaagatcagatttattccatgtga
DBGET
integrated database retrieval system
