Caloenas nicobarica (Nicobar pigeon): 135989923
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Entry
135989923 CDS
T11056
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
cnic05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135989923 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135989923 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135989923 (SRSF5)
Spliceosome [BR:
cnic03041
]
Common components
Common spliceosomal components
SR proteins
135989923 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
135989923
NCBI-ProteinID:
XP_065493101
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All DBs
Position
5:36771259..36775743
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AA seq
265 aa
AA seq
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MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGK
ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLVVENLSSRVSW
QDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSK
RHSRSRSRSQSRSGSSSRSRSRSRSRSRKSYSRSRSRSHSKSRSVSRSPMPEKSQKRGSS
SRSKSPSSEDRHRSRSRSRSVDSGN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgccgcgtcttcatcgggaggctgaacccggccgccagggagaaggatgtg
gagaggttcttcaagggatacggacgcatccgggacatcgatctgaagagggggtttggg
tttgtggaatttgacgatccgagggatgcagatgatgccgtctatgaattggatggaaaa
gagctttgcagtgagagggttacaattgagcatgcaagagcacgctctaggggtagaggc
agagggaggtactctgaccgttttagtagccgccgtccacgtagtgacaggagaagtgcc
ccacctttaagaacagaaaatcgcctcgtagtggaaaacttgtcttccagagtcagctgg
caggatctcaaagacttcatgagacaagctggggaagtaacctttgcagatgcacacaga
cctaagttaaatgaaggggtggttgaattcgcctcttacagtgatttaaagaatgctatt
gaaaagctttctggtaaagaaattaatggaaggaaaatcaaactaattgaaggcagcaaa
cggcacagtaggtccagaagcaggtcgcagtctcgtagcggaagctcatccaggtctcgt
agccgttcccgttcccgcagccgcaagtcttacagcaggtcaaggagtaggagccatagc
aagtcccggtcagttagtagatctccaatgccagagaagagccagaaacgtggttcttcc
agcagatctaaatctccatcatctgaggatcggcacaggtctcggtcaaggtccagatct
gttgacagtggcaactga
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