Caloenas nicobarica (Nicobar pigeon): 135990115
Help
Entry
135990115 CDS
T11056
Symbol
PGAP1
Name
(RefSeq) LOW QUALITY PROTEIN: GPI inositol-deacylase
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cnic01100
Metabolic pathways
Module
cnic_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
135990115 (PGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135990115 (PGAP1)
Membrane trafficking [BR:
cnic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
135990115 (PGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
PGAP1_2nd
Abhydrolase_1
Palm_thioest
Abhydrolase_6
DUF676
Hydrolase_4
Peptidase_S9
Lipase_3
Motif
Other DBs
NCBI-GeneID:
135990115
NCBI-ProteinID:
XP_065493611
LinkDB
All DBs
Position
6:3419944..3451959
Genome browser
AA seq
1011 aa
AA seq
DB search
MAPAPRDMADGPCPARGSGSRPSPDLPKMAAALPLPAAAGLCRQPAPPPGRCRSPPRRAC
VRGEPAAGRRLRWLRAAMGRAGRWLPAVAALFYAALVLLGVRDVLFLYEENRCSMTYMYE
YPEYLKIKLPKKTARRYPAYELYLYGEGNYAEENKNLLLTGIPVLFLPGNAGSYKQVRSL
GSIALRKAEDIDFKYHFNFFSVNFNEELVALYGGSLQRQTKFVHECIKVILKLYRDREFA
PTSVAIVGHSMGGLVARALLTLKNFKPELINLLITQATPHVAPVMPLDKYLTDFYTAVNN
HWILNAQDLRNLTTLSVAGGFRDYQVRSGLAFLPRLSQHDGALSVVSSAVPRAWASTDHL
SIVWCKELILATIRAFFDLIDEDTRQITEDPKKRMSVLNHHFVRHPAKIFEENPEALTEL
TGAFTWITVKALKWTYSVYNDSDGKYFTFPLASHRKSYSHVYCENSMLDTSSWIYGCMNS
NSSMCLEATDLSWRAELLPTTKVVILKLQEYPSLSHIVIQVPPAAGNKYALDCEFFQEDS
RTVQLPVTHLFSLGLSSSKIVLNSTGLLYNVQLQHFNQIYQAFKIHVESHCQSLKERKPN
VYRLHIPWSHEDSIIVAKVPSLTEISAKLHIAQPQNDSRVPELNIYSSSDCQYEVILQTS
LIQILGQIMRFHAGALPAYVVSNILLTYGGQLSTWISTGQCSDFTLELVRTAKPYKVEPL
ISVVVFLQGFNWFREIWESLSLPEVDAAALSSQDTWFPLVSLILFLFGTGIAYWSGVFFS
ISLRLFSSLWFTLIRPTVFQKDTKLLTPRGLCGVLSLALVSWTTCGAFAIVIIYLQYWFK
VIKLHVNLRAEQNTLNGDSDRSKETSRKSSKDTVKNQSSIDCTSKATQSVPNSTTAEAVN
SLKMHVTVLHLFTWVMLLNLPSLIYWLKNLRYSVRLDPDPCRSTAIILVCILKILINSNI
SELKSSKLLKIAAKVPLPLSVAMVAFGRLHLYKVPHFVTFSLLLHVLCCIV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgccccccgcgacatggcggacgggccctgcccagcccgggggagcggcagc
cggcccagcccggaccttcccaagatggcggccgccctcccgctgcctgcggccgcgggg
ttgtgtcgccagcccgccccgcctcccgggcggtgccgctccccgccccgccgcgcctgt
gtgcgcggagagcccgcggcaggacggcggctccgctggctccgcgccgccatggggcgg
gcgggccgctggctgcccgcggtggccgcgctcttctacgcggcgctggtgctgctgggg
gtgcgggacgtgttgttcctctacgaggagaaccggtgcagcatgacctacatgtacgag
taccccgagtacctgaaaataaaattaccgaagaaaacagccagacgatacccagcatat
gagctgtatctctatggagaagggaactatgcagaagaaaataaaaatctcctattgacg
ggaattccagttctctttcttcccgggaatgctggcagttacaaacaagtacgttctctt
ggctccattgcgcttagaaaagcagaagatattgacttcaagtatcattttaatttcttc
agtgtcaactttaatgaggagttggttgcattgtacggtggtagtctgcaaagacagacc
aagtttgtgcatgaatgcataaaagtaattcttaagctgtacagggatcgagaatttgca
ccaaccagcgttgcaatagtaggtcattccatgggtggccttgttgcaagagcattgctt
actctgaagaattttaagcctgaacttataaacctcctcattacacaagccacgcctcat
gttgcacctgtaatgcctttagacaaatatcttactgatttttatacagctgtaaacaat
cactggattctaaatgcccaagatttaagaaatttaactaccctttcggtggcgggagga
ttcagagattaccaagttcgttcaggactggcttttctaccaagactgagtcaacatgac
ggtgccttatctgttgtgagctcagctgtgcctagagcatgggcctcaacagaccatctc
tctatagtgtggtgcaaagaattgatcctggctaccattagagctttttttgatcttata
gatgaagacacaagacagataactgaggatccaaagaagagaatgtctgtactgaatcac
cactttgtgagacaccctgcaaagatatttgaggaaaatcctgaagctttaacggaactc
acaggagctttcacatggattacagtcaaagccttgaaatggacttactcggtttacaat
gattctgatgggaagtatttcacatttcctcttgcaagccacagaaaatcatacagtcat
gtttactgtgaaaacagtatgttggacacaagtagctggatttatggctgtatgaacagt
aattcatcgatgtgcctggaagctactgatttatcctggagagctgagttacttccaacc
accaaggttgtaatactgaaacttcaggagtatccttctttgtcccacattgtcattcag
gtgccacccgcagctggcaataagtatgctttggactgtgaattcttccaagaggattcc
agaacagtacagcttcctgtaacacatctcttttcacttgggctttcttcaagcaaaatt
gtattaaattcaactggcttactttataacgtacagctccagcactttaaccaaatatat
caagcattcaaaattcatgtagagagccactgccagtcactcaaagaaaggaaacctaat
gtttacagacttcatataccctggtcacatgaagactcaataattgtagcaaaagttccg
tctcttactgagatttctgccaaactgcatattgctcagcctcaaaatgacagcagggtt
ccagagctaaatatttactcttcctcagactgtcagtatgaagtaattctgcagacgtca
cttatacagattcttgggcaaataatgaggttccatgctggtgctcttcctgcctatgtt
gtttctaatattcttcttacttacggaggacaactgagcacatggatatcaacaggccag
tgttcagactttacccttgaactagttaggacagctaaaccctacaaagtagaacctctt
ataagcgttgtcgtgtttctgcaggggtttaactggtttagagaaatatgggaatcactg
tcactgccagaggtggatgcagctgcactgagtagtcaggacacgtggttcccccttgtg
tccctgattctatttctttttgggacaggcattgcctactggagtggagtatttttctct
atatctctgagactcttctcttcgttatggttcactctgattagacctactgtatttcaa
aaagataccaagttactgacacccagaggactctgtggagtgttatctcttgctttggtc
agctggaccacttgcggtgcatttgctatagtcattatttaccttcaatactggtttaag
gttataaaactacatgtgaatctaagagcagaacaaaacacgcttaatggggattcagac
cgctcaaaagaaacttcacggaagtccagtaaagacacagtcaaaaaccagagttcgatc
gactgtacttcaaaagcaacacaatctgttcccaacagtacaactgctgaagctgttaac
agtcttaagatgcatgttacagttctccatttattcacatgggttatgctgctcaacttg
ccatctttaatttattggttaaaaaatctcaggtacagcgttagacttgatcctgatcca
tgtagatctacagctattatcctcgtatgcattttgaaaattctcattaattcaaatatt
tctgaattgaaatcaagtaaactactgaagatcgctgccaaagttccactccctttgtct
gttgcaatggtggcctttggacgactgcatttatacaaagtaccccacttcgtaaccttt
tctcttcttctacatgtgctgtgttgtattgtgtaa
DBGET
integrated database retrieval system
