Caloenas nicobarica (Nicobar pigeon): 135990119
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Entry
135990119 CDS
T11056
Symbol
ITGA4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04510
Focal adhesion
cnic04512
ECM-receptor interaction
cnic04514
Cell adhesion molecules
cnic04672
Intestinal immune network for IgA production
cnic04810
Regulation of actin cytoskeleton
cnic04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135990119 (ITGA4)
Exosomal proteins of other cancer cells
135990119 (ITGA4)
Cell adhesion molecules [BR:
cnic04515
]
Integrins
Integrin alpha subunits
135990119 (ITGA4)
CD molecules [BR:
cnic04090
]
Proteins
135990119 (ITGA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
DUF11
Motif
Other DBs
NCBI-GeneID:
135990119
NCBI-ProteinID:
XP_065493615
LinkDB
All DBs
Position
6:complement(16521776..16560493)
Genome browser
AA seq
1024 aa
AA seq
DB search
MWSCGRTRRAAGWAAPLLLLWQCLPTARPYNLDTQQPLLFRGDNGTLFGYSVLLHSHGEE
RWLVAGAPRASWPANSSVTNPGAIFRCRIGRNPRGRCEQLQLGDPRGERCGKTCLEERDN
QWLGVSLSRQPKENGSVVACGHRWKNIFYIRNEHKLPHGICYAISSDFRTELSRRICPCY
IDHVRKFGENHGSCQAGISSFYIEDLIIMGAPGSFYWTGSIFVYNTTANTIHAYTDSNNQ
VKFGSYLGYSVGAGHFLTSASTEVVGGAPQQEQTGKAYIFSIEKQLNILFELRGKKLGSY
FGAAVCAVDLNSDGLSDLLVGAPMQSTIREEGRVYVYINSGSEAKMVELNIELSGSDSYA
ARFGESIANLGDIDNDGFEDVAIGAPQEDDLKGVIYIYNGRENGITPSFSQRIQGHEVSN
SLSMFGQSIASGIDADNNGYQDVAVGAFLSDSAVVLRTKPVIIVEASLKHPNSINRTNLN
CMENDQPAVCMNLKICFTYTGREVPGYIVLLYNLSVDVNRKVDTQARFYFSFNGTSDAIS
GNVKIYSKNVACKDHPAFMRKDVRDILTPVHVEASYHLGHHILQKRNAQEFSPLQPVLQQ
RKEKDVIKSKFVFARFCSQENCSADLRVSGKVAFPKPHDKKMYLAVGSMKTLLLNVSLLN
AGDDAYETVLHIHIPKGLYFIRVLELEEKQIHCEVLDKEIHAVKLECSIGYLYVDHKSKL
DFSFLLDASSFTRAEDDLNIVINATCKNEDGNMLLDNTLTLAVPLKYEIELNAHGFVSPA
SFIYGTSEKDSPVTCMKENINFTFHVMNAGPSMAPNTNLEITIPNAFPPNDFKLFNTLDI
KTTVGQCSYNKYPRDCSAAEKNENILKDVVTFFSKPAKRQMYCMKNDNLCLQIYCTLGSM
ESGKEATVQLHLEATPSLLEMDDASALKFEVRATASPEKNAKVIELHKDKQVAYVYLEGV
HHQKPKYRVTVLIIGLGLIVGVTLFLLLSLLLWKIGFFKRQYKPVPQDKNTRNSWSFTSG
NKDD
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctgcgggcggacgaggagggctgcgggttgggccgccccgctgctcctgctg
tggcagtgcctgccgacggcgcggccctacaacctggacacccagcaaccgctgctcttc
cgaggagacaacgggaccctcttcgggtactcggttctcctgcacagccacggcgaggag
agatggctcgttgcgggcgccccccgagccagctggcccgccaacagctcggtgaccaac
cccggggccattttccggtgccggatcgggaggaacccccgcgggcggtgcgagcagctc
cagctgggcgaccccaggggagagcgctgtgggaagacgtgtttggaagaacgtgataac
cagtggctgggtgtcagcttatcgaggcagccaaaagaaaacggatctgtcgttgcttgc
ggacatagatggaaaaatatcttttacataagaaatgaacacaaactcccacatggtatt
tgttatgccatctcctccgattttcggactgaactgagcagaagaatatgcccatgctat
atagatcatgtacgaaagtttggagaaaaccatgggtcatgccaggctggaatctctagt
ttttatattgaggacttaattataatgggagcccctggatcattttactggaccggttct
atttttgtatacaatacaactgcaaatacaatccatgcttatacagattcaaataaccaa
gtgaaatttggcagttatctaggatactctgttggagctgggcattttctgacatcggcc
agtacagaagtagttggaggggccccccaacaggagcagactggtaaagcatacatcttt
agcattgagaagcaactaaatattctatttgaactaaggggtaaaaagcttggttcttac
tttggagctgcagtttgtgctgtggacctgaattcagatggcctctcagacttgctagtt
ggtgctccaatgcagagtaccatcagagaagaaggaagagtttatgtctatatcaattca
ggttctgaagcgaagatggtagaactgaacatagagctcagcgggagtgactcatatgca
gccaggtttggagagtccatagccaacctaggagacattgataatgatggttttgaagat
gtagcaattggggctccacaagaagatgatctgaaaggggttatttatatatacaatggc
agggaaaatggaataacaccatcattttcacagagaatacaaggacacgaagtcagtaat
tctttaagcatgtttggacaatccatagcaagtggcattgatgcagataacaatggttat
caagatgtagcagttggtgcatttctctccgattctgctgtggtgctgagaacaaaaccg
gtgataattgttgaagcttctttaaaacatcctaattcaataaatcgaactaatttaaac
tgcatggaaaatgaccagcctgctgtctgtatgaatttgaagatatgctttacctataca
ggacgagaggtacctggttatattgtactgctttacaatctaagtgttgatgtgaacaga
aaagtggatacacaagcaagattttatttttccttcaatggaacatctgatgcaatctca
ggaaatgtaaagatttacagcaagaatgttgcctgcaaagatcatccagcatttatgagg
aaagatgtaagggatatcttgactcctgtacatgttgaagcaagttatcatctgggtcat
catattctacagaaaagaaatgctcaagaattttcaccacttcaacctgttcttcaacaa
aggaaagaaaaagatgttataaaaagcaagtttgtttttgccagattttgctcccaagaa
aattgttctgctgacttgagagtttctggaaaagttgcttttccaaagcctcatgataag
aaaatgtatctcgctgttggaagcatgaagactttattgttgaacgtttctctgcttaat
gctggagatgatgcatatgaaactgtcctccacattcacatccctaaaggtctttatttc
atccgagtcttagaattggaagaaaaacagatccattgtgaagtattagataaagaaatt
catgcagtgaaacttgagtgcagcattggttatttatatgtagatcacaaatcaaagctg
gattttagtttcctcttggatgcaagctcatttaccagagcagaagatgacctcaacatc
gtcattaatgctacctgtaaaaacgaagatgggaacatgttgctggataacacactaact
ttagctgtacctctaaaatatgagattgagttaaatgctcacggatttgtatcaccagct
tcatttatttatggaacaagtgagaaagattcaccagttacatgtatgaaggagaatata
aacttcactttccatgttatgaatgcaggaccaagcatggctccaaatacaaacttagag
ataacgatacctaatgcttttccacccaatgacttcaaattattcaacacattggatatc
aagacaacagttgggcagtgttcctataataaatatcccagagactgtagtgcagcagaa
aaaaatgagaacatattaaaagatgttgtcactttcttttcaaagcctgctaagagacaa
atgtactgcatgaaaaatgacaacctttgcttacaaatatattgcacacttggaagcatg
gaaagtggaaaagaagcaactgttcagttgcatctggaggctactccttcacttttagaa
atggatgatgcatcagcattgaagtttgaagtaagagcaacagcctcaccagaaaagaat
gcaaaagttattgaactacacaaggacaagcaagttgcatatgtctatttggaaggagtg
caccaccaaaagccaaaataccgtgttactgtgctaattattggactaggcctaatagtt
ggtgttaccttgtttttgcttctttcacttctgctatggaagattggctttttcaaaagg
caatacaagccagtccctcaagacaagaacacaagaaacagctggagttttacaagtggg
aacaaagatgactaa
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