Caloenas nicobarica (Nicobar pigeon): 135990142
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Entry
135990142 CDS
T11056
Symbol
ITGB2
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04145
Phagosome
cnic04514
Cell adhesion molecules
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135990142 (ITGB2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135990142 (ITGB2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135990142 (ITGB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135990142 (ITGB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135990142 (ITGB2)
04515 Cell adhesion molecules [BR:
cnic04515
]
135990142 (ITGB2)
04090 CD molecules [BR:
cnic04090
]
135990142 (ITGB2)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135990142 (ITGB2)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135990142 (ITGB2)
Cell adhesion molecules [BR:
cnic04515
]
Integrins
Integrin beta subunits
135990142 (ITGB2)
CD molecules [BR:
cnic04090
]
Proteins
135990142 (ITGB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
135990142
NCBI-ProteinID:
XP_065493649
LinkDB
All DBs
Position
6:complement(5844273..5856649)
Genome browser
AA seq
773 aa
AA seq
DB search
MLRDCCLQLPVVTWVLLLVTMASATECPKIKVGTCNDCIQSGPDCAWCKKPGFTKAGEPD
SVRCDTVEQLQQRGCPQDEIQFPTSNATRTQNSPLSSDIQLSPQAVHLKLRIGQPAVFEV
KFRRAMGYPIDLYYLMDLSYSMLDDLEKVKKLGGELLRALESTTPSRRIGFGSFVDKTVL
PFVNTHPEKLQNPCPNKDTPCQPPFAYKHILSLTDDAKKFESEVGKQFISGNLDAPEGGL
DAMMQAAVCGDLIGWRNVTRLLVYATDDGFHFAGDGKLGAILTPNDGQCHLEDNMYKKSD
EFDYPSVGQLVQKLAENNIQPIFAVTSKMVDVYKKLSEMIPKSAVGELNEDSSNIIELIQ
EAYNNLSSRIILDHSPLPDVLEVKYDSICSQGNVISDEARGQCDNVKINEEITFRVKVTA
KECIKSQSFTIRPLGFTDTLTVHLDSNCNCSCDEQPDPTACSGKGSVVCGICSCNPGYMG
KNCECETKGKTSKELEGSCRKDNSSVICSGLGDCVCGECICHASDVPDKKIYGPYCECDN
VNCEFYNGSVCGGKDRGTCNCGECECKPEFQGSACQCKKSTENCLNSRKNECSLRGTCHC
NRCQCRGLYQPPFCLECPSCPSPCGRYVSCVECKAFESGPFAKNCTQACPNIRTAEESKE
ESRQCKEKDSNNCWISFRMIQDDGEEMYTIIVDSKKECPEPPNIALIVGGTIAGVALIGL
VLLLIWRLLTELFDRREYRRFEKEKSKAKWNDADNPLFKSATTTVVNPRFNGQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgactgctgcctccagctgccggtggtgacctgggtgctgctgctggtgacg
atggcctctgccacggagtgccccaagatcaaggtggggacgtgcaacgactgcatccag
tctggtcctgactgcgcctggtgcaagaagccgggtttcaccaaagctggtgagccggac
tccgtccgctgcgacactgtggagcagctgcagcagagggggtgcccgcaggatgagatt
cagtttccaaccagcaacgctacgaggacacagaacagtcccttaagcagcgacatacag
ctgagtccccaggctgtgcacctgaaactgcggataggccagcctgctgtttttgaggtg
aagtttcgccgcgccatggggtaccccatcgatctctactacctcatggacctctcctac
tccatgctggatgacctggagaaggtgaagaagctgggaggggagctgctcagagccctg
gagagcaccaccccttctcgacgcatagggtttggctctttcgtggacaagacagtgctg
ccctttgtgaacacgcaccctgagaagctgcagaacccctgccccaacaaggacacgcca
tgccagcctcccttcgcctacaagcacatcctctcactgactgatgacgccaagaagttt
gagagcgaagtggggaagcagttcatctcggggaacctggatgccccggagggggggctg
gatgccatgatgcaggcagcggtgtgtggggacttgatcggctggcgcaacgtgacccgc
ttgctggtgtacgctaccgacgacggcttccactttgccggtgatggcaaacttggggcc
atcctgacccccaacgacggccagtgccacctggaggacaacatgtacaaaaagagcgat
gagtttgactacccatctgttggccagctggtccagaaacttgctgaaaacaacattcag
cccatttttgctgttaccagtaagatggtggatgtttacaagaaactcagtgagatgatc
ccaaagtcggcagtgggagagctgaatgaggactccagcaacatcattgaactcatccag
gaggcctacaacaacctctcctcgcggatcatcctggaccacagccccctgccagacgtc
ctggaggtcaaatatgactctatatgcagtcagggcaatgtcatctcagatgaagccaga
gggcagtgtgacaacgtcaagatcaatgaagagatcaccttcagagtgaaggtcacggcc
aaggagtgcatcaaaagccagtccttcaccatccggcccctgggcttcacggacaccctc
accgtccacctggacagcaactgcaactgcagctgcgacgagcagcccgacccgaccgcc
tgcagtgggaaaggcagcgtcgtctgcgggatctgcagctgcaatccaggctacatgggg
aagaactgcgagtgcgaaaccaaaggcaagaccagcaaggagctggagggcagctgcagg
aaggacaacagctcggtcatctgctcgggtctgggggactgcgtgtgcggggagtgcatc
tgccacgccagcgatgtgcccgacaagaagatctacggcccctactgcgagtgcgacaac
gtgaactgcgagttttacaacggctccgtctgtggcggcaaagaccgtgggacgtgcaac
tgcggggagtgcgagtgcaagcccgagttccagggcagcgcctgccagtgcaagaagtcc
acggagaactgcttgaacagccgcaagaacgagtgcagcctccgtgggacctgccactgc
aaccgctgccagtgccgggggctgtaccagccccctttctgcctggagtgccccagctgc
ccctcgccctgcggcagatacgtctcctgcgtggagtgcaaggccttcgagagcggcccc
ttcgcgaagaactgcacccaggcctgccccaacatccggacagctgaggaatcgaaggag
gagagcaggcagtgcaaggagaaggactccaacaactgctggatctccttccgcatgatc
caggatgacggcgaggagatgtacaccatcatcgtcgactctaaaaaagagtgtccggag
cctcccaacatcgcgctgatcgtgggaggcaccatcgctggtgtggccctcatcggcctg
gtgctgctgctgatctggcggctcttgacggagctgtttgaccgccgggaataccgccgg
tttgagaaggagaagtccaaggccaagtggaatgatgctgataaccccctcttcaagagt
gccaccaccacggtcgtgaaccccaggttcaacgggcaatga
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