Caloenas nicobarica (Nicobar pigeon): 135990208
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Entry
135990208 CDS
T11056
Symbol
GTF3C3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135990208 (GTF3C3)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
135990208 (GTF3C3)
TFIIIC, fungi type
135990208 (GTF3C3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_2
TPR_1
TPR_16
TPR_19
TPR_6
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_11
TPR_15
TPR_9
ARM_TT21
TPR_EMC2
TPR_4
Motif
Other DBs
NCBI-GeneID:
135990208
NCBI-ProteinID:
XP_065493766
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All DBs
Position
6:3458867..3477795
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AA seq
909 aa
AA seq
DB search
MSGFSPELIDYLEGKISFEEFERRREERKSREKDGENASAEENTEDVEAPSSSKKAPGKS
QQEDETDGETSDGVSKSVHRVFASMLGENEEEEEDEEEEEEEEEETTEQPTAGDVFVLEM
VLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPF
STLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAVFCYTKALKY
DATNVRYLWERSSLYEQLGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDV
TSAIDIVEEAFTKHQSLVSMEDINIAAELYISSKQYDKALAVITDFAGIVLEKKLPQKSP
TEEKKDTEAVVETEESQETATDDQSHPVAESSAAAVEKVTCCIPEGVPIDITVKLMVCLV
HLNILEPLSPLLTTLVEQNPEEMGDLYLDVAEAFLDVGEYNSALPLLSSLVCSERYNLAV
VWLRHAECLKALGHMERAAESYAKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMY
DPDTLAQDANAAQQELKLLLHRSTLLYSQGKMYGYIDTLLTMLAMLLKVAMSRAQVCLIS
SSKSGERHLYLIKVSRDKISDNDDQETANCDAKAIFAVLTSVLTKDDWWNLLLKAIYSLC
DLSRYNEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENV
NKPQLWNIFNQVTMQSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALGQYV
QAFRANPDEPLYSLCIGLTFIHMASQKYLLKRHALVVQGFSFLHRYLDLRGPCQESFYNL
GRGLHQLGLLHLAIHYYQKVLELPPLALEGIETDQTDLRRDAAFNLSLIYQSSGNTRLAQ
KMLYTYAVV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcagcccggagctgatcgattatctggaggggaagatctccttcgaggag
ttcgagcggcggcgggaggagcgcaagagccgggagaaggatggcgaaaatgcatctgct
gaggaaaacactgaagatgtagaggctccatcttcatccaaaaaagcacctgggaaatcc
caacaggaggatgaaactgatggagaaacttcagatggcgtcagtaaatctgttcatcgg
gtctttgcatccatgcttggggaaaatgaagaggaggaggaggatgaagaggaggaagaa
gaagaggaagaagaaactactgagcaacctacagctggagatgtttttgtgttggagatg
gtacttaatcgagagaccaagaaaatgatgaaagagaaaagaccccgcagcaaactgcct
cgtgccttgaggggtctgatgggagaagccaatatcaggtttgctcgaggagaacgtgag
gaggcgattctaatgtgcatggagatcattcgacaagctcctcttgctcatgagccattt
tccacccttgccatgatctacgaagaccagggtgacatggagaagtcgttacagtttgaa
ctgattgcagctcacttaaatccgagtgacactgaggaatgggttagactcgcagaaatg
tcactggaacaggacaacattaaacaggccgttttttgctacacgaaagctctgaaatat
gacgcgaccaatgtgcgttacctgtgggagagatcaagcctgtacgagcagctgggggaa
cataagctggccatggatggctacaggcggattttgaatctcctgtcgccctctgacgga
gagcgcttcatgcagttggctagagacatggcaaagagttattatgaagccaatgatgtg
acctctgctattgacatagtagaagaggcctttactaaacaccagagccttgtctccatg
gaagacattaacattgcagctgaattatatatttcgtccaaacagtacgacaaagcattg
gcggttattacagattttgctggaattgtacttgaaaagaaactaccacaaaaaagtcca
accgaggagaagaaagatacagaggcagtggtagaaactgaggaaagccaagagacagca
actgatgaccaaagtcacccagttgctgaatccagtgctgcagctgtggagaaagtcacc
tgctgcatacccgagggtgttcccatagacatcacggtcaagctgatggtgtgtttggtt
cacttgaacatcctagagccgctcagtcctcttttgaccaccctggtggaacaaaatccg
gaagaaatgggtgacttgtacttggacgtcgcagaggcatttctggatgttggagagtac
aactcagcgctgcctctcctgagttccctggtctgttcagagcgatacaacctggctgtt
gtctggcttcggcatgcagagtgcttgaaggctttgggacacatggagcgtgccgcagag
agctatgccaaagtcgttgatctcgctccattgcatctggatgcaagaatctcactttca
acacttcagcagcagctgggccgacccgaaaaagctctggaggctctggaacccatgtat
gatccggatacactggctcaggacgctaatgctgcccagcaggaattaaagctgctcctc
catcgttcgacactgttgtattcccaaggcaaaatgtatggttacatagacactttactg
acgatgctggcaatgctgttgaaggtagcgatgagcagagcccaggtgtgtttgatatct
agttccaaatctggagagagacacctctatctcattaaggtgtcaagggataaaatttct
gacaatgatgaccaagagacagcaaattgcgatgcaaaagcaatctttgctgttctcacg
agtgttctgacaaaagacgactggtggaacctcctcctgaaggctatttattccttatgc
gacctctcccggtacaacgaggcagagctactagtggattcctcattggaatattactca
ttttacgacgacagacagaagcgcaaggagctggaatacttcggcctctcggctgcaatc
ctggacaagaatttcagaaaagcgtacaactacatcaggattatggtaatggaaaacgtc
aacaaacctcagctatggaacatattcaatcaagttacgatgcaatctcaggatgttcgt
caccatcgcttttgtctccgcttaatgctgaagaatcctgacaatcatgcactgtgtgtc
ctgaatgggcataacgcgtttgtgtctggcagtttcaagcatgctcttggacagtatgtg
caagcctttcgtgcaaacccagatgaacctctgtacagtctttgtatcggcttgactttc
atccacatggcttctcagaaatacctgttgaaaaggcatgctcttgtagtacagggattc
tccttcctgcaccggtacctggacctgcgtgggccctgtcaggagtcgttctacaacctt
ggccgtggcctccaccagctgggattgctgcatctggctatccactactaccaaaaagta
cttgaacttcctccgcttgccctagagggaatagaaactgatcagacagacctgagaaga
gacgctgcctttaacttgtccctgatttatcagagcagtggaaacacgaggctggctcag
aagatgttgtatacttacgcagttgtttga
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