Caloenas nicobarica (Nicobar pigeon): 135990211
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Entry
135990211 CDS
T11056
Symbol
ALS2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135990211 (ALS2)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
135990211 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
VPS9
MORN
RhoGEF
PH
DUF7341
YoaP
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
135990211
NCBI-ProteinID:
XP_065493768
LinkDB
All DBs
Position
6:2198972..2232864
Genome browser
AA seq
1656 aa
AA seq
DB search
MDSQDSSSGEAEGAKERGLVYVWKAGSCSVTPERLPGLCGKTVLQAALGIQHGLLLTEGG
EVYSFGKLPWRSGLEESCARSPVVENTLLGHRVITVAAGSFHNGAVTESGVVYMWGSNSA
GQCAVADQPCVPEPQPISISDSETSPLLSVRILQLACGEEHTLALSLSREIWAWGSGCQL
GLITTTFPVTKPQKVEHLAGRVVLQIACGAHHSLALVQCLPAQEMKPIPERCNHCSQLLI
TMTDKEDHVIISDSHCCPLGVALSDNPPESRGFCPSSETPEGKSITGSQSEDCQKPLVEE
HTLVALESDRASVLSSNDGQEDGGVSSPGNVLFPEKKEVKEYFISLSDHSLNENLEKNIC
TEPEQPSQEEELSACIPGPPGTSTSALNSLVASCASAVGVRVAATYEAGALSLKKVMNFY
GTSSSDPASQSAGGSPGPEALKDSREEQVRLESMQGKKSSSLVDIREEESEGGSRRLSLP
GLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGKGKEGQLGHGDVL
PRLQPLCVKSLDGKEVIHLSAGGHHSLALTAKSQVYSWGSNSSGQLGHLNSPTTVPRLAK
VCGDGVWSTAAGADYSLFLADEEDFQPGLYYSGQETATDNLHENSCTKSPVLLLSCSKIG
YISNVIAGGDNCLVLVDKNVMGYIASLHELASTERRFYFKLSEIKSQILRPLLGLDNLGN
ANTIQLLQEMASRFSKLCYLIGQHGASLSSFLHGVKEARSLAILKHSSLFLDSYSEYCTS
VTNFLVMGGFTLLAKPAIDFLSKNQELLQKLSEKNEENLQLVEVLNALFFMPFGQLHNYA
RTLLKLATCFEVASPEYQKLQDSSSCYENLAVHLSRKRKEAEYTLGFWKTFPGKMTDSLR
KPERRLICESSNRGLSLQHAGRFSVNWFILFNDALVHAQFSTHHIFPLSTLWVEALSEET
GNVNGLKITTPEEQFVLVSSTPQEKTKWLRAISQAVDQALRGTSDSILYGAGGNVPRQEP
PISRSAKYTFYKDPRFKDAVYDGRWLSGKPHGRGTLKWADGRMYSGTFRTGLEDGYGEYR
VPNKALNKDDHYVGYWKEGKMCGHGVYSYATGEVYEGCFQDNMRHGHGLLRSGKLTSSSP
SMFIGQWTMDKKCGYGVFDDITRGEKYMGMWQDDLCQGNGVVVTQFGLYYEGAFSTNKMM
GTGILLSEDDTVYEGEFSDNWTLSGKGTLTLPNGDYIEGLFSGEWGSGIKITGTYFKPSL
YENEKDKPKALLMGAFVRRKLGILAVPPDEKWKAVFEECWSQLGCDSPGQGDRWKAWDNI
AVALTTNRRQHRDSPELLSRSHTQTLESLEFIPQHIGAFTLEKYENIKKYLIKACDTPLH
PLGKLVETLVAVYRMTYVGVGANRRLLQEAVREIKSYLKRIFQLVRFLFPDLPEEGSTIP
FLAPETKGRRSFCSAKSDSRSESPEPGYVVTSFGLLLPVLLPRLYPPLFMLYALDNEREE
DIYWECVLRLNKQTDLALLSFLGVQAKFWPGTVSVLGESRKVSSNTKDACFASAVECLQQ
ISTTFTPADKLKVIQQTFEEISQNVLETLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEV
HLIEDLMDPYLQHGEQGIMFTTLKACYYQIQHEKLT
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaggacagcagctcaggagaggcagaaggagccaaagagagaggcctggtc
tatgtttggaaggctggttcctgctccgtcactccagaaaggcttccaggcctctgtgga
aagactgtgttacaggcagcccttggaatacagcatggcttgctgctaacagaaggtgga
gaggtgtacagctttggaaagctgccctggagatcaggactggaggagtcatgtgccagg
agtcctgtcgtagaaaatactttgcttgggcatcgtgttattacagtggcagctggcagc
ttccataacggagccgtgacagaaagcggcgtggtgtacatgtgggggagcaactctgct
ggccagtgtgcagtcgctgatcagccgtgtgtgccggagccacagcccatcagtatttcg
gattccgaaaccagccctctgttgtcagtaaggattttgcagctggcatgtggagaggag
cacacgctggccctgtcgctgagccgggagatatgggcttgggggagcggctgccagctg
ggtctcataacaacgaccttcccggtgacgaagccccagaaggtggagcacctggcaggc
cgcgttgtgctccagatcgcctgcggagcgcaccacagcctggccctggtgcagtgtctt
cccgcgcaggagatgaaacctatcccggagagatgcaaccattgcagtcagctactcatc
accatgacggacaaggaagaccatgtcatcatttcagatagtcactgctgcccgctgggg
gtagcgctgtctgataacccaccagaaagccgtggcttctgtccttcctcggagaccccg
gaaggcaaaagtataacaggtagccaaagcgaagactgtcagaaaccacttgtggaagag
catacgcttgttgctttagaatctgatagagcaagcgtgctttccagcaacgatgggcaa
gaagatggtggagtttccagccctggaaatgttctgttcccagagaaaaaagaagtgaaa
gagtacttcatcagtttatcagatcactcattaaatgagaacctggagaaaaacatctgc
acagaacctgagcagccttctcaagaagaagaactcagtgcttgtatccctggccctcca
ggtaccagcacatctgccttgaacagcttggtggcctcttgtgcgtcagcagtcggtgtg
agagtggctgctacgtatgaagctggagcgttgtccctgaagaaagtaatgaacttctat
ggcacttcttcaagtgacccagcatctcagtctgctggcgggtccccggggcccgaggct
ctgaaggacagtcgagaagagcaggtcaggctggaatccatgcaggggaagaagagttcc
agtttagtagacattagagaggaggaatcggaaggagggagtcggagactttccctgccc
ggcttgttgtcacaagtttctccaaggctcctccggaaggtagggcgggcaaaaatgagg
actgtggctctgactccaacctacagtggtgaggctgatgctcttttaccctctctaagg
acagaggtgtggagctggggaaaggggaaggaaggacagcttggacatggcgacgttctg
ccgaggcttcagccgctgtgtgtgaaaagcctagatggtaaagaagtgattcacctctct
gctggtggccatcattccttagcactcactgccaaatcccaggtgtattcatggggcagt
aatagctctggccagcttggtcacttgaactccccaacaacggtccctcgtctcgcaaag
gtgtgtggtgatggtgtttggagtacagcagcaggagcagattattccctcttcttagca
gatgaggaagacttccaacctggattatattacagtggccaggagacagcaacagacaat
ttgcatgaaaacagctgtactaagagtccagttttgttactatcctgtagcaagataggg
tacataagcaatgtgatagctggtggtgacaactgcttggtattagtagacaaaaacgta
atgggatatattgccagtttgcatgagttggcttctactgagagaaggttttatttcaaa
ctgagcgagatcaaatctcagattcttagacctcttttaggtttagataacttgggcaat
gcaaatacaatccagttgttgcaggaaatggcaagcaggttcagcaagctgtgctatctc
atcggtcaacacggagcttctttaagtagctttcttcatggagtaaaagaagccaggagc
ttggccatcctcaagcactccagtctctttttggatagttactctgagtattgtacttca
gtgacaaacttcctcgtcatgggaggatttacgcttctggcaaagccagcaatagacttc
ttgagtaaaaaccaggagctgttacagaaactgtctgagaagaatgaggaaaacctccag
ctagtggaagttctgaatgctctgtttttcatgccatttggacaacttcataattacgct
agaactctgctaaagcttgccacgtgttttgaagtggcatctccagaataccagaagcta
caagattctagttcttgttacgagaacctcgctgtccatctgagcaggaaaagaaaagaa
gcagaatacacacttggcttctggaagacctttcctgggaaaatgacggactccttgcgg
aaaccagagcgtcgtttaatctgtgaaagcagcaatcggggtttgtcgctgcagcatgct
ggaagattctctgtcaactggttcatcctcttcaacgatgctctggtacacgctcagttc
tcaacgcaccatatttttcccttgtccacactgtgggtagaagctctttcagaagaaacc
ggtaatgtgaatggattgaagattacaacaccagaggagcagtttgttcttgtttcttca
acaccacaggaaaagaccaagtggctgagggcgataagccaagcggtggatcaggccctt
agagggacttctgactcaattctatatggagctggtgggaacgtgccaagacaggaacct
cctatttctcgcagtgccaaatacaccttctataaggaccctcgatttaaggatgctgtt
tatgatgggagatggctttcaggaaaaccccacggcagaggaacactcaagtgggcggat
ggaagaatgtactctgggactttccggactgggctggaggatgggtacggcgaataccga
gtgccgaacaaagcgctgaacaaggatgaccattacgtggggtactggaaggaaggcaaa
atgtgtgggcacggggtctacagctatgctactggtgaggtgtatgaagggtgtttccag
gataacatgcggcacgggcacgggctgctgcgcagcgggaagctgacctcgtcctctccc
agtatgttcatcgggcagtggacgatggataagaagtgtggttatggagttttcgatgat
atcacacgaggagagaagtatatgggaatgtggcaggatgatctgtgccaaggcaatggt
gttgtggtgacgcagtttggactgtattacgaaggagccttcagcaccaacaaaatgatg
gggactggaattcttctctctgaggatgatacggtctatgagggggaattttcagataac
tggactctgagtggaaagggaacactgaccttgcccaatggagattatattgaaggtctc
ttcagtggagaatggggatctgggataaaaatcacaggaacctacttcaaacccagcttg
tatgagaatgagaaggacaaacctaaagcattactaatgggtgcctttgttaggcggaag
ctggggatcctggcggtgccccccgacgagaagtggaaggcagtgtttgaggagtgctgg
agccagctgggctgcgacagccccggccagggcgaccgctggaaggcttgggacaacatc
gccgtggccctgaccaccaaccggcggcagcacagggacagcccagaattattgagccgc
tcacatactcagacactggaaagtttggaattcattccacaacacattggtgccttcacc
ctggaaaaatatgaaaatataaaaaaatatttgataaaggcttgtgatactcctctgcat
ccgctgggcaagctggtggaaacgctcgtagctgtctacaggatgacctacgttggcgta
ggcgctaaccggcggttactgcaggaggctgtcagggagatcaagtcctacctcaagcgc
atcttccagttggttaggttcttgtttcctgatctcccggaagagggcagcacaattcca
tttctggcaccagagacaaagggaaggcgatcgttttgcagtgcgaaatcagattccaga
tcagagtctcctgagccgggctatgtggtaaccagttttgggttgctgctccccgtgttg
ctgccacggctctaccctcctctgtttatgctgtatgccttagacaacgagcgggaggaa
gatatttactgggaatgtgttttacgtctaaacaaacaaacagatctggctcttctgagt
tttcttggagtgcaagcgaaattttggccaggaactgtatctgtcctcggagagagtcga
aaggtatcctcaaacacaaaagatgcctgctttgcctctgcagttgaatgtttgcagcaa
atcagcaccacatttaccccagctgacaagctgaaggtgatccagcaaacttttgaagag
atctctcagaatgtactcgagacacttcaggaagattttctgtggtccatggatgactta
tttcctgtttttctctatgtggtgctacgagccaggataaggaatttggggtctgaggtg
cacttaatcgaagacctgatggatccttatctgcagcatggggagcaaggcatcatgttc
actacattgaaggcatgttactaccagattcaacacgaaaagcttacctag
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integrated database retrieval system
