Caloenas nicobarica (Nicobar pigeon): 135990296
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Entry
135990296 CDS
T11056
Symbol
LSS
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00100
Steroid biosynthesis
cnic01100
Metabolic pathways
Module
cnic_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
135990296 (LSS)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
135990296 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
DUF4817
Motif
Other DBs
NCBI-GeneID:
135990296
NCBI-ProteinID:
XP_065493942
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All DBs
Position
6:complement(5596237..5604836)
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AA seq
670 aa
AA seq
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MRFYAALQAEDGHWAGDYGGPLFLLPGLLITCHTAKIQLPEGVRKEMVRYLRSVQLPDGG
WGLHVEDKSTVFGTALNYVALRILGLGPDDPDIVRARVNLHSKGGAVGIPSWGKFWLAVL
NVYSWEGMNTLLPEMWLLPTWFPAHPSRLWCHCRQVYLPMSYCYATRLSAEEDELIRSLR
QELYVQEYTSIDWPAQRNNVAAGDVYTPHSWLLDVAYGIMNMYEAHHSTHLRQRAITELY
DHIKADDRFTKCISIGPISKTINMLVRWFVDGKNSPAFQEHVSRIPDYLWLGLDGMKMQG
TNGSQLWDTAFAIQAFLEAEAQMMPEFTSCLQNAHEFLQFTQIPENPPDYQKYYRHMNKG
GFPFSTRDCGWIVADCTAEGLKSVMLLQEKCPFIAKLVPPERLFDAVNVLLSMRNSDGGF
ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAAMQALRHFHEEFPEHRAPEIRETL
QKGLDFCRKTQRADGSWEGSWGVCFTYGTWFGLEAFASMQHTYRDGAACQEVAQACQFLL
SKQMADGGWGEDFESCEQRTYVQSATSQIHNTCWALLGLMAVRYPDIEVLERGIKLLIDK
QLPNGDWPQENIAGVFNKSCAISYTAYRNVFPIWTLGRFCRLHPNSPLAGKLQSGSSAGA
GETVQEALSA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcggttctacgccgccttgcaggctgaggacgggcactgggcaggtgactacggcggg
cccctcttcctcctcccaggtctcctcatcacatgccacactgccaagatccagctgccc
gagggggttcggaaagagatggtgcgctacctgcgctctgtgcagctcccggatggaggc
tggggcttgcatgtggaggacaaatcgaccgtgtttggcacagcactcaactacgtagcc
ctgaggatcctgggcctcggaccagacgaccctgacattgtgcgggctcgtgtcaacctg
cacagcaaaggaggtgctgtgggaatcccttcctggggaaagttttggctggctgtcttg
aacgtttacagctgggaaggaatgaacacacttctcccagagatgtggctgcttcctacg
tggttcccagcccacccgtcccggctctggtgtcactgccgccaggtttacctccccatg
agctactgttacgccacgcgtctgtcagcagaagaggacgagctcatacggagcttacgg
caggagctgtatgtgcaagagtacaccagcatagactggccagcccagaggaacaatgta
gctgccggcgatgtgtacaccccgcacagctggctgctggacgttgcctatggcatcatg
aatatgtacgaagcccaccacagcacccacctgcggcagcgagccatcacagagctgtac
gaccacatcaaagctgatgacagattcaccaagtgcatcagtattgggccgatttccaag
acgatcaacatgcttgttcgctggtttgtggatgggaagaactccccagcttttcaggag
catgtttccaggatccctgactatctctggctgggcctcgacggcatgaagatgcagggc
acaaatggatcccagctctgggatactgcctttgccatccaagccttcttggaggcagaa
gcccagatgatgcctgaattcacatcctgcctccaaaacgcccatgagttcctccagttc
acccagatcccagagaacccacctgactaccagaaatattatcgccatatgaacaagggt
ggcttccccttcagcacccgagactgtggctggatcgtggcagactgcacagcagagggg
ctgaagtcagtcatgctgctgcaggagaagtgccccttcatagccaagcttgtcccccct
gagcgcctctttgatgccgtgaatgtgttgctgagcatgaggaactcagatggaggcttt
gccacatatgaaaccaagcgtggaggccacttactggagctgctgaacccttcagaggtg
tttggtgacatcatgatcgactacacctacgtggagtgcacgtcggctgccatgcaggca
ctgagacacttccacgaggagttccctgagcacagagccccagagatcagggagactctg
cagaagggcctggacttttgtcgcaagacacagcgagccgatgggtcctgggaagggagc
tggggggtttgtttcacttacggcacctggtttggtctggaggcgttcgccagtatgcag
cacacataccgcgatggggctgcgtgccaagaggtggcccaggcctgccagttcctcctc
tccaagcagatggcagatggtgggtggggagaggacttcgagtcatgcgagcagcgcacg
tatgtgcagagtgccacatcgcagatccacaacacgtgttgggccctgctggggctcatg
gctgtcaggtaccctgacatcgaagtgctggaaagaggcatcaagctgttgattgataag
cagctgcccaacggggactggcctcaggagaacattgctggggtgttcaacaagtcgtgc
gccatcagttacactgcctaccgcaacgtcttccccatctggacactggggcgtttctgc
cggctgcatcccaacagcccccttgctgggaaactacaatctgggtcctcggctggggca
ggggagaccgtgcaggaggccttgtctgcctga
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