Caloenas nicobarica (Nicobar pigeon): 135990446
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Entry
135990446 CDS
T11056
Name
(RefSeq) LOW QUALITY PROTEIN: mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135990446
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135990446
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
135990446
NCBI-ProteinID:
XP_065494209
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Position
6:42514339..42533303
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AA seq
567 aa
AA seq
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MQDPRSAEAGEEEAAELHGGECRKAERMFRNGHTLFGVLNYTKTPGGSRRLRSSILEPPA
DAETMNTRLDCVQELLQDEQLFFGLQAVILKFLDTEQLLYLLVQVPXQDMVKTAESKITN
LIYLKHTLELVEPLKAALRSCNTSLLKVYYNSLEDTRFGIVLEKITTVINDDTRYTKGCL
SMRTQKCYAVKPNIXEFLDIAHRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQ
MSVDCSALPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLL
NEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLFDYGSYVPAEYCSFRIAEQIFTRIGMDD
DIETNSSTFMKEMKEITYIIQNANDKSLIIMDELGRGTSAEEGIGICYAACEYLLNLKAF
TLFATHFLELCHIDALYPNVENYHFEVQHVRSNAGNKEKIAYTYTLSKGCTEEKNYGLKA
AEVSSLPSSVILDAKEITNHIAKQILHRQKSTPEMMKQRAVYQLAMRLVQTARNSRLDPE
SLRMYLKGLKKKYEASCPAPGQNDEQW
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccctcggagtgctgaagctggagaggaggaggcggctgagctccacggcggg
gaatgccgcaaggcagagagaatgttcagaaatggtcacacacttttcggtgtcctaaat
tacactaaaactccaggtggaagccgcagacttagatccagtatcctagagccaccagct
gatgctgaaacaatgaacacgagactggactgtgttcaggaattactccaggatgagcag
ctcttttttggtcttcaagcagttatcttaaaattcctggatacagaacaactactttac
cttttggtacaagttccatagcaggatatggttaaaaccgctgaatcaaaaataactaat
ttaatctacctgaagcatactcttgaacttgtggaacctctaaaagctgcattaagaagc
tgtaacacgtcgctgctaaaggtttattacaattctcttgaagatacaaggtttggaata
gtacttgaaaagattacaactgtaattaatgatgatacaaggtacacaaaaggatgtctg
agtatgaggacccagaaatgctatgctgtgaagcctaacatanatgaattccttgacata
gctcatagaacatacacagaaattgtcgatgacatagcaggtatgataacacaacttgca
gaaaagtacaacctaccaatgaaaacaagcttcagctctgctcgtgggttttttatccag
atgagtgttgattgttctgcattacccaacggccaacttccttcagaattcacaaagatc
actaaaatgaaaaacacatacagcttcacttcagcagatttaataaaaatgaatgaaaga
tgtcaggagtccctgagagaaatctatcacatgacctacttaatagtgtgtaaactactg
aacgagatctatgagcacattcattgcctgtacaagctgtctgacattgtgtccatgctg
gatatgctgctctcgtttgcccacgcctgcactctgtttgattatggttcgtatgtccca
gcagagtattgttcttttcgaattgcagagcaaatttttaccagaataggtatggatgat
gatatagaaacaaattcttcaacattcatgaaggaaatgaaagagataacatatatcata
caaaacgctaatgacaaatcacttatcatcatggacgaacttggcagaggtaccagtgct
gaagaaggtattggcatttgctatgctgcctgtgaatatctgttgaatttaaaggcattt
acattgtttgctacacattttttggaactgtgtcatatagatgctttatatcccaatgtg
gaaaattaccactttgaagtgcaacatgtcagaagcaatgctggaaataaagagaaaatt
gcttacacttacacactctctaaaggctgtacggaggaaaagaactatggattaaaagct
gccgaagtttcctccctaccatcatctgtaattttggatgcaaaggaaatcacgaatcat
atcgcaaaacaaattttgcacaggcagaagagcactcccgagatgatgaaacagagagct
gtgtaccagttagcgatgagactggttcagaccgccaggaattctcgactggatccagag
agtttgcgtatgtatttgaaaggcttaaagaaaaagtacgaagccagttgtcctgcacct
ggacaaaatgatgagcaatggtaa
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