Caloenas nicobarica (Nicobar pigeon): 135990557
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Entry
135990557 CDS
T11056
Symbol
ABCB11
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135990557 (ABCB11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135990557 (ABCB11)
04147 Exosome [BR:
cnic04147
]
135990557 (ABCB11)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
135990557 (ABCB11)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135990557 (ABCB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
AAA_28
AAA_15
AAA_21
SRP54
Rad17
Motif
Other DBs
NCBI-GeneID:
135990557
NCBI-ProteinID:
XP_065494372
LinkDB
All DBs
Position
6:21530406..21571699
Genome browser
AA seq
1352 aa
AA seq
DB search
MSDPVILHSIKRLGEDNYAFDLDGKCNSFKKSENFHTYEEPFTEKKSEKSSDKKENSIRV
GFFQLFRFSSPMEILMMVVGSFCAIVHGAAQPAVLLVLGAMADTFIEYDIEMQELEAPGK
TCVNNTIVWINGTIHQNEKNATIRCGLLDIEQEMTKFAGYYAGIGCAVLVLGYLQICLWV
MAAARQIQKIRKAYFRKVMRMDIGWFDCTSVGELNTRISDDVNKINEAIADQVAIFIQRL
TTFVCGFLLGFVSGWKLTLVIIAVSPLLGVGAAVYGLAVAKLTGRELKAYAKAGAVADEV
LSSIRTVAAFGGEKKEVERYDKNLVFAQYWGIRKGIIMGAFTGYMWLIIFLCYALAFWYG
SKLVLEEEEYSPGTLLQVFFGILVGALNLGQASPCLEAFATGRGAAANVFETIDKKPIID
CMSEDGYKLDKVRGEIEFHNVTFHYPSRPDVKILDNLNMVIKAGETTAFVGASGAGKSTT
IQLIQRFYDPTDGMITLDGHDIRSLNIQWLRSQIGIVEQEPVLFATTIAENIRYGRDEAT
MEDIIKAAKQANAYNFIMDLPQQFDTHVGEGGSQMSGGQKQRIAIARALVRNPKILLLDM
ATSALDNESEAIVQEALHKARLGRTAISIAHRLSAIKAADVIVGFEHGRAVERGTHDELL
KRKGVYFMLVTLQSKGDTALSRGAKETAENNVVEPNLEKVQSFSRGSYRASLRASLRQRS
RSQLSNVVPDPPLSIAGDHAESMYLTPSYGEDDGQAKKESAVVEEDVKPVPFTRILKYNA
SEWPYMVLGSLAAAVNGAVSPLYALLFSQILKTFSILDEEEQRTQINGVCLLFVFVGIIS
FFTQFLQAYTFAKSGELLTRRLRKIGFQAMLGQDIGWFDDRKNSPGALTTRLATDASQVQ
GATGSQIGMIVNSFTNIGVAMIIAFYFSWKLTLVILCFLPFLALSGGVQAKMLTGFASQD
KKALEATGRISSEALSNIRTVAGIGKEKMFISNFEKNLVMPYRAAIKKAQVYGLCFGFAQ
SIVFIANAVSYRYGGFLVSSEGLHYSFVFRVISAIVTSGTALGRASSYTPNYAKAKTSAA
RFFQLVDRLPKISVYSEKGEKWEDFKGSIEFINCKFTYPSRPDIQVLKGLSVAVNPGQTL
AFVGSSGCGKSTSVQLLERFYDPEQGRVLIDGHDTKRINVEFLRSKIGIVSQEPVLFDCS
IADNIKYGSNTKEATMEKVIEAAQKAQLHDFVMSLPDKYETNVGAQGSQLSRGQKQRIAI
ARAIIRDPKILLLDEATSALDTESEKTVQAALDKAREGRTCVVIAHRLSTIQNADIIAVM
SQGLIIERGTHDELMAMEGAYYKLVTTGAPIS
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccctgttattctccatagcatcaagaggttgggagaggataactatgctttt
gacttggatggcaaatgtaacagcttcaagaaatcagagaatttccatacatatgaggaa
ccttttacagagaagaaaagcgaaaagtcatcagacaagaaagaaaacagcattcgtgtt
ggcttctttcagctgtttcggttttcttcacctatggaaattttaatgatggttgttggt
agtttctgtgctatcgttcatggagcagcccagccagctgtgttgcttgtgcttggtgca
atggcagacacgtttattgaatacgacattgaaatgcaagagcttgaagccccaggcaag
acatgtgtaaataacactatagtgtggattaatggtactatccatcagaatgaaaagaac
gccacaataagatgtgggctcttggacattgaacaagaaatgacgaagtttgcaggttac
tatgcagggattggttgtgccgtacttgtgttaggatacctccaaatctgcctttgggtt
atggctgcagctcgtcagatacagaaaatcaggaaagcttatttcaggaaagtaatgcga
atggatataggctggtttgactgtacatctgtaggagaactgaacacccgaatttctgat
gatgtcaacaaaattaatgaggctattgctgaccaagtagcaatctttatccagcgctta
accacctttgtgtgtggattcctactgggatttgtcagtggctggaaactgaccttggtt
atcattgcagtcagccccctgcttggggtcggagcggctgtctatggtttggctgtggca
aaactaacaggccgagaattaaaggcttacgcgaaagctggagctgtggctgatgaagtg
ctctcatccatcagaacagtggctgcttttggtggggagaagaaagaagttgaaagatat
gataagaatctggtgtttgctcagtactggggaattcgaaaaggaataataatgggagca
ttcactggttacatgtggcttataattttcctgtgttatgcattagccttttggtatggc
tctaaacttgtccttgaagaagaagagtattcacctggcactcttctgcaggttttcttt
ggcattttagtaggagctttaaatcttggccaagcatctccctgtctggaagcctttgcc
actggccgtggggctgcagcaaatgtttttgagacaatagataaaaaacccatcattgac
tgcatgtcagaagatggctacaagctggataaagtacgaggtgaaattgaatttcataat
gtaacattccattatccctccagaccagatgtaaagattttggataaccttaatatggtt
attaaagcaggggagacaacagcttttgttggagctagtggagctggaaaaagtacaaca
atacagctcattcagcgtttctatgaccccactgatggcatgattaccctggatggccat
gacattcgttccctcaatatccagtggctacgctcacagattggtattgttgagcaagag
ccagtgctgtttgccaccacgattgcagagaacattcgctatggtcgggatgaggccacc
atggaagacataatcaaagcagccaaacaggccaatgcttacaatttcatcatggatttg
ccacagcaatttgacactcacgttggagagggtggaagccagatgagtggaggtcaaaaa
cagaggatagctattgctcgagctcttgtgcgaaacccaaaaatcctgctactggatatg
gctacgtcagcacttgataatgaaagtgaagcaattgtccaagaagcgcttcataaggct
cgccttggccgcacagcaatctcgatagctcaccgcctgtcagccatcaaagcggccgat
gtcatcgttgggtttgagcatggaagggctgtggagagaggaactcatgacgaactcttg
aagaggaaaggggtttatttcatgttggtgaccttgcaaagcaaaggagacacagcactt
agcagaggagcaaaggaaacagcagaaaataacgtggttgagccaaatcttgagaaagtc
cagtcattcagcagaggaagctatcgggccagtttgcgagcttcacttcggcagcgctcc
agatctcagctctctaatgtggtccctgaccctccattatccattgcaggagatcatgca
gagtctatgtatctgacgccttcttatggagaagatgatggacaggcaaaaaaggaatct
gctgttgtggaggaagatgtcaagcctgtaccatttaccagaattttgaagtacaatgcc
tctgaatggccatacatggtgcttggatctctggcagcagctgtgaatggagcagtcagt
ccactctatgctttgttattcagtcagattcttaagaccttctccattcttgatgaagaa
gaacaaagaacccagatcaatggtgtctgcctgctctttgtctttgtcggaattatttcg
tttttcacacagtttttacaggcatatacttttgccaagtctggtgagctgcttacaaga
cggttacggaaaattggtttccaggctatgctggggcaagacattgggtggttcgatgac
cggaagaacagccctggtgctttgactacaagacttgcaacagatgcttctcaggtccaa
ggggcaactggatcacagataggaatgattgtcaattcctttaccaacattggggtggcc
atgatcattgctttctacttcagctggaaactcactttagttatactgtgtttcttgcca
tttttggccttatctggaggtgtgcaggctaaaatgctgacaggattcgcctctcaggac
aagaaagcgctggaagctactggacggatttccagtgaagccctctctaatatcaggact
gtagctgggatagggaaagagaaaatgttcatcagcaattttgagaagaacctggttatg
ccctatagagccgcaataaaaaaagcacaagtttacggactctgctttggctttgcccag
agcatcgtgttcattgccaacgctgtctcgtacagatacggtgggtttctggttagcagt
gaaggcctccattacagcttcgtgttcagggtcatctctgctattgtgaccagtggaact
gctttaggaagagcttcttcgtataccccaaactatgccaaagccaaaacatccgctgca
cgcttttttcaactggtcgaccgtcttccgaaaatcagtgtttacagtgaaaaaggagaa
aaatgggaagatttcaagggaagcattgaatttattaactgtaaattcacatacccttct
cggcctgatattcaggtcctgaaaggcctctctgtagccgtgaaccctggacagactttg
gcatttgtcggaagcagcggctgtggtaagagcaccagtgtccagcttctggagcgtttc
tacgaccctgagcaaggccgtgtgttaatagatggacacgacaccaagagaataaatgta
gaatttcttagatcaaaaattggaatagtctcccaggagcctgtgctgtttgactgcagc
atcgctgacaacattaaatatggcagtaacaccaaagaggcaacgatggaaaaagtcata
gaagcagcccagaaagctcagctgcacgattttgtcatgtcactgcctgataaatacgaa
actaatgttggagctcaaggatcccagctgtctcgtgggcaaaaacaacgcattgctata
gcaagggccatcatacgagatcctaaaattttattactggatgaagctacatctgcttta
gacacagaaagtgagaagactgtgcaggcagcgctggataaggccagagaagggcgtacc
tgcgtcgtcattgcccaccgcttgtccaccatccagaacgccgacatcatcgctgtgatg
tcacaaggactcatcattgaaaggggcactcatgatgaactgatggccatggaaggagct
tattataagctcgttaccactggagccccaattagctga
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integrated database retrieval system
