Caloenas nicobarica (Nicobar pigeon): 135990572
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Entry
135990572 CDS
T11056
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135990572 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135990572 (HSPD1)
03110 Chaperones and folding catalysts [BR:
cnic03110
]
135990572 (HSPD1)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135990572 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135990572 (HSPD1)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135990572 (HSPD1)
Messenger RNA biogenesis [BR:
cnic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135990572 (HSPD1)
Chaperones and folding catalysts [BR:
cnic03110
]
Heat shock proteins
HSP60 / Chaperonin
135990572 (HSPD1)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135990572 (HSPD1)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135990572 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
135990572 (HSPD1)
Exosomal proteins of breast cancer cells
135990572 (HSPD1)
Exosomal proteins of colorectal cancer cells
135990572 (HSPD1)
Exosomal proteins of bladder cancer cells
135990572 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
135990572
NCBI-ProteinID:
XP_065494426
LinkDB
All DBs
Position
6:3263835..3272376
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPAVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDTVIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANSHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLSLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDTIAPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSPAEIGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTETPKEEKEAAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttgcctgcagtgctccgccagatcaggccggtgtccagagcgctcgcccca
cacctcacacgtgcgtacgccaaagatgtgaagttcggagcagacgccagagctctcatg
cttcaaggagtggatctcctagcagatgctgtagccgtcaccatggggccaaagggaaga
accgttattattgaacaaagctggggaagtcccaaagtgacaaaagatggggtgacagta
gcgaaggcaattgacttaaaggacaaatacaaaaatatcggagcaaagttagttcaagat
gttgccaacaacacaaatgaagaggcgggagatggtaccaccacggcgaccgtgcttgca
cgggctattgccaaggaaggcttcgagaagatcagcaaaggagctaatccagttgaaatc
aggaggggggtgatgcttgcagttgatactgtcatagctgaactgaagaagctgtcgaaa
cctgttacaactccagaagaaattgcacaggttgccacgatatcagcaaatggagatcaa
gaaattgggaatataatctcggatgcaatgaagaaagttgggcgaaagggtgtaatcact
gtgaaggatggaaaaactctaaatgatgaattggaaatcattgagggtatgaaatttgac
agaggctacatctctccatattttattaatacaaccaaagggcagaaatgtgaattccaa
gacgcttacgttttaatcagtgaaaagaaaatttctagtgtacagtccatagttccagct
cttgaaattgccaattctcaccgcaaacctttggtcatcattgctgaagatgttgatgga
gaagctctcagcactctagtcttgaacagactgaaggttggtcttcaggtggttgctgta
aaagcaccaggttttggtgacaacaggaaaaaccagcttaaggacatggcgattgctact
ggtggtgctgtgtttggagaagagggtttgagcctgaacgtggaagatattcagcctcat
gactttggcaaagttggagaggtcattgtgacaaaagatgacaccatgcttctaaagggg
aagggtgaaaaggctcaaattgaaaaacgcattcaagaaatcattgagcagctagaagtc
accacaagcgactatgaaaaagagaaactgaacgagcgattggccaagctctctgatgga
gtagcagtgttgaaggttggtggcacgagtgacgttgaagtgaacgagaagaaagaccga
gtgacggacgccctgaacgcgacccgcgctgctgtggaggagggcatcgtcccgggcggt
ggctgcgccttgcttcgctgcattccagcattggataccatagctccagccaacgaagat
cagaaaattggcattgaaataataaagagaacactgaaaatcccggcaatgactattgca
aagaatgcaggtgttgaaggatcattaatagttgaaaaaatcctgcagagtccagcagaa
attggctacgatgcaatgctcggggactttgtaaatatggtagaaaaaggaatcattgac
cccacgaaggttgtgagaaccgccctcatggacgctgcgggtgttgcgtctctcttatcc
acggcagaagcggtggtgactgaaactcctaaggaggaaaaggaggcggcgatgggagga
atgggtgggatgggcggagggatgggagggggcatgttctaa
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