Caloenas nicobarica (Nicobar pigeon): 135990714
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Entry
135990714 CDS
T11056
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135990714 (SORCS3)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Others
Others
135990714 (SORCS3)
Endosome - Lysosome transport
135990714 (SORCS3)
Endosome - Golgi transport
135990714 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
135990714
NCBI-ProteinID:
XP_065494768
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All DBs
Position
7:complement(12541116..12834186)
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AA seq
1211 aa
AA seq
DB search
MEKRTNCFPTCHIVFLAWTWLLLLSWCCTGAEITCGSCSPPSPFWPSSSSRLRQEQRQPP
PRGLWSWPGGRTRGSAGAAAAAEPLPGGEPGGRTGPRGAALRSAGAGSGAPGGRGPAAPR
SRRSSEGRRALPAAGGRGVPAAEGQRGARAQPRVRLEEGRAERLRGAEELRLSSTTFALT
GDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKVGLKT
VLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEEWIL
AYSLDQKLYSSMDFGRKWQLMHERVTPNRFYWSVTGLDKEPDLVHMEARTADGHTHYLTC
RIQECLETKRSGPFSRSIDVSSLVVQDEYVFLQVTAGGRANYYVSYRREPFAQIKLPKYS
LPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNIIID
LYEVAGIKGIFLANKKIDDQIKTFITYNKGRDWHLLQAPDTNLRGDPVVCQQPFCSLHLH
LQLSENPYTSGSISSKETAPGLLVATGNIGSELSYADVGVFVSSDGGNSWRQIFEEEYNV
WFLDWGGALVAMKRTSVPIRHMWVSFDEGRSWSKYSFTSTPLFVDGSLVDPGIDTQIMTV
FGHFSLRSEWQLVKVDYKPLFSRRCNKDDYQTWHLHNQGEPCVMGERKIYKKRKPGAQCS
LGRDYSQSVVSEPCVCSQGDFECDYGYERHSNNQCVPAFWFSPSSLSKDCSVGQSYLNST
GYRRIVSNNCTDGLQEKYMAKMEKCPGKAPRGLHILTNDGKLVTEQGHNATFIILMEEGD
LQRTNIQLDFGDGIAVSYANFSPVENGIRHVYKSAGIFQVTAYAENSLGSDTAVLFLHVV
CPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNNTKPLITLESSISYVFAV
EGMNTVTVQVSAGNTLIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDIGKVIRR
ALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEILFNALNQN
LVQFELKPGVEVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIP
WINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVIGSISTIANSE
STKEIPNCTSV
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcggactaactgctttccgacctgccacatcgtttttctcgcctggacatgg
ctcttacttctctcttggtgttgcaccggcgccgaaataacttgcggatcctgctcgcct
ccatcacccttctggccgtcctcctcgtctcgccttaggcaggagcagcgacagccgccg
ccgcgaggattatggagctggccgggcggccgaacgcggggctcggccggggcggcggcc
gccgcggagccgctgccgggcggggagccggggggccgcacggggccgcggggagcggcg
ctccgctcggcgggggcgggcagcggcgcgcccgggggccggggcccggcggcgccgcgg
agccggcggagcagcgaggggcgccgggcactgccggcggccggcggccggggggtgccc
gcggccgaggggcagcgcggagcccgggctcagccccgtgtgcgcctggaggaggggaga
gcggagcggctgcgaggggcagaggagctgaggctgagcagcaccaccttcgcgctcacc
ggggatgcggcgcacaaccaagccatggtgcactggtccgggcacaacagcagcgtgatt
ctcattctgacaaagctttacgacttcaacttggggagtgttacggagagctcactgtgg
aggtcaacagactatggcactacctatgaaaagctaaatgacaaagtaggcctgaagact
gtgctgagctacctttatgtcagtcccactaacaagaggaagatcatgcttctcagtgat
ccagagattgagagcagcatcctcatcagctctgatgaaggggctacctaccagaagtac
cgtctgaacttctatatccagagtttgctcttccaccccaagcaggaggagtggatctta
gcctacagtctggatcaaaagctgtacagctccatggactttggaagaaaatggcagctc
atgcatgagcgggtcactccaaacagattttactggtcggtgaccggtttggataaagaa
cctgaccttgtgcacatggaagcacggacagctgatggacacacccactacttgacctgt
cggatccaagagtgcttggagaccaaaaggagtggaccattttcacgctccattgacgtc
agctcccttgtcgttcaggatgaatatgtcttcctccaggtgacagctggtggaagagca
aattactatgtgtcatacagacgggagcctttcgcgcagattaaattgcccaaatactct
cttcctaaggacatgcatattatcagcacagatgagaatcaggtgtttgcagctgttcaa
gagtggaaccagaatgatacatacaacctgtatatctcggacacccgaggggtgtacttc
accctggccttggaaaacgtgaaaagcagtcgaggactggagggaaatattatcattgac
ctttatgaggtagcagggatcaaaggcatattcctggctaacaagaagatagatgaccaa
attaagactttcattacctacaacaagggcagagactggcatttactgcaggcaccagac
actaatctaagaggggatcctgtagtttgccagcagcccttttgctcattgcacttacat
ctgcaactctcagaaaatccctatacttcaggaagcatttccagcaaagagacagctcct
gggctgctggtggcaacaggcaatattggctctgagctttcctacgctgatgttggtgta
ttcgtctcttctgatggtggaaattcctggagacagatcttcgaggaggaatacaacgtg
tggttcctggattggggaggggcactagtggccatgaaacgcacatcagtgcccatccga
cacatgtgggtgagttttgatgagggaagatcctggagtaaatacagtttcacatcaaca
ccgctttttgtggacggatcccttgtagaccctggcatagacacccagataatgacagtg
tttgggcacttcagcctccgttctgaatggcagctggtcaaggtggactacaagcctctc
ttcagccggaggtgtaacaaggatgactaccaaacctggcatctacacaaccagggggag
ccttgtgtcatgggagagagaaagatctataaaaaacgcaagcctggagcgcagtgttcc
ctcggtcgagactactcccaaagtgtggtgtctgaaccatgtgtctgcagtcaaggggac
ttcgagtgtgactatggatatgagaggcacagcaacaaccagtgtgtcccagccttctgg
ttcagcccgtcctccctctccaaggattgcagcgttggtcagagctacttgaacagcact
gggtaccgaaggattgtgtctaacaactgcacagatggcttgcaagagaaatacatggct
aagatggagaaatgccctggaaaagcacctcggggactgcacatcctcaccaatgatgga
aagttggtcacagagcagggacacaatgccaccttcatcatacttatggaagagggtgat
ctccagaggacaaacattcagcttgattttggagatggcattgcagtatcctatgctaat
ttcagccctgttgagaacggcatccggcacgtgtacaaaagcgctggcatctttcaggtg
acagcgtatgcagagaacagcctgggctctgacaccgctgtcctcttcctgcatgtggtc
tgtccagtggagcacgtccatctgagtgtcccctttgtcgccatcagaaataaggatgtc
aacattactgcagtagtttggcccagccaggcaggcacactcacctacttctggtggttt
ggcaacaacaccaagcccctcatcaccttggagagcagcatctcatacgtcttcgctgtg
gaggggatgaacactgtcactgtgcaggtttctgcgggcaacaccctcatccaggacacc
aaggagattgcagtgcacgagtatttccaatctcagctcctgtcattttctcccaacttg
gactaccataaccctgacatccctgagtggagacaagacattggcaaagtcatcaggaga
gctcttgcacaggtgacgggtatccctgatgaacagatcctggtagctgtatttcctggg
ctgcctacttctgctgaactcttcatactgccccataaaaacacaacagagaggaggaaa
agcagtgaggctgatctggagcaagtggtagaaatcctttttaatgctctcaaccagaac
ctggtccagtttgaactgaagcctggtgttgaagtcattgtgtatgttactcagttaaca
ttagcaccccttgttgattccagcacgggtcatagcagttcggcaatgctgatgttgctg
tctgtggtgtttgtaggcttggctgtttttttaatctacaaattcaagaggaaaatccct
tggattaacatctatgcccaagttcagcatgacaaggagcaggaaatgattggctctgtc
agccaaagtgaaaatgcccccaaaatcactctgagtgagttcacagaccccgaggagctg
atggacaaagagctggacacgcgagtgataggaagcatctcaacaattgccaacagtgaa
agcacaaaggaaatcccaaactgcactagtgtttaa
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integrated database retrieval system
