Caloenas nicobarica (Nicobar pigeon): 135990722
Help
Entry
135990722 CDS
T11056
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135990722
03036 Chromosome and associated proteins [BR:
cnic03036
]
135990722
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135990722
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
Pre-60S particles
Helicases
135990722
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135990722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
135990722
NCBI-ProteinID:
XP_065494787
LinkDB
All DBs
Position
7:34975705..34988512
Genome browser
AA seq
786 aa
AA seq
DB search
MGGVWSRAARLGLPAARAAAPLSGRRRCWLSGPGPLLLLAAALPRGPGRPPAALRAAPHF
LRAGAGRGVWGRRWDTGGSSSSAAAAAQLSGEPPAAMPAAGPAASPAEPQAPAGDESLRR
GRRRKAKDASQEKKPKRREKLKRRGQAEGEQAQPEESGLGELEPPLPKKTKQAEEQSGGA
ERAVKPSAAASSGVTAPAEQDGDAEELTEEAKEGAFSNFPLSQNTINLLKARGVKYLFPV
QVKTFQPIYDGKDVIAQARTGTGKTFSFALPLIEKLQSVSQDGRRGRSPKVLVLVPTREL
ATQVAKDFKHLTRKLSVACFYGGTPYKEQLDLLKSGIDILVGTPGRIKDHIQNSKLELSS
VKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYDVAKKYMKD
EYEQIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKKEAN
ELAMNASLKQDAQSLHGDIPQKQREVTLKGFRTGVFEVLIATNVAARGLDIPEVDLVIQC
SPPKDVDSYIHRSGRTGRAGRTGVCICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVI
KASSNDAKKLLEAIPPSAVDYFRKSAQELIDEKGAVAALAAALAHISGASYIQQRSLLNS
TAGFVTMVLKCSIEMRSMSYAWRGLKDQLGEEVDGKISAMRFLKGKMGVCFDIPVDELSN
IQEQWKDTRRWQLSVAEELPELEESPQEAGRGFSRFGNGRQSDGGFKRNNWFKNGNRGRD
FNKSLD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtgtggagccgggcggcgcggctcggcctccccgcggcccgggcggcggcc
ccgctcagcggccggcggcggtgctggctgtcggggccgggcccgctgctgctgctggcg
gcggcgctgccccgcggcccgggccgcccgccggccgcgctccgcgccgcgcctcacttc
ctgcgcgccggggcggggcgcggcgtctggggccgccgctgggacacgggcggcagcagc
agcagcgccgccgccgccgcgcagctctccggggagccgcccgccgccatgcccgccgcc
ggccccgccgccagccccgccgagccgcaggcgccggccggggacgagtccctgcggcgc
ggccgccggaggaaggcgaaggacgcgagccaggagaagaagccgaagcggcgggagaag
ctgaagcggcgcggtcaggccgagggcgagcaggcccagcctgaggagagcgggctgggc
gagcttgagccccccctgcccaagaagacaaagcaagccgaggagcagagcggcggcgcc
gagcgtgcggtgaaaccttccgccgctgcgagcagcggagtcacggccccggcagagcag
gacggcgatgccgaggagctgacagaagaagcaaaagaaggcgccttttccaattttcct
ctctcccaaaacaccatcaaccttctcaaagctcgaggtgtaaaatacctgttccctgtg
caagtgaagacttttcagcccatatatgatggcaaagatgtaattgctcaagctcgaaca
ggaactgggaaaaccttttctttcgctcttccgctgattgaaaaacttcaaagtgtctcg
caagatgggagaagaggccgttcaccaaaagtgctggttcttgttccaaccagggaactg
gccacacaggtagccaaagacttcaagcatctcaccaggaaactgtccgtggcttgtttt
tatggaggaactccgtataaagaacagcttgatctccttaaaagtggcattgatattcta
gtgggaactcctgggcgcatcaaagaccacattcagaatagcaagctggaactttccagc
gtgaagcatgttgttttggatgaagtcgatcacatgttagacatgggctttgctgaacaa
gtggaagaaatcttaggatttgcttataaaaaaggttctgagaacaacccccagacgctg
ctgttttctgcaacttgcccacgatgggtatatgatgtggcaaaaaaatacatgaaagat
gaatacgaacagattgacctgattggaaagaagacgcaaaggactgccacgactgtggaa
cacttggctatacagtgtcgctcatctcagagagcaggagttctcggggatatcattcaa
gtctacagcggcagccgtggccggaccattgtcttttgcgagaccaaaaaggaagcaaat
gaactcgctatgaatgcctcactcaaacaggatgcccagtccttgcatggtgacattcca
cagaaacagagagaagtaacattaaaaggctttagaactggtgtgtttgaagttctcatt
gcaacaaacgtagctgcccgtggtttggatattcctgaggttgaccttgttatacagtgt
tcaccaccaaaagatgtcgattcctacatccatcgttctgggcgaacgggtcgagccggc
cggaccggggtctgcatttgtttatttcagagaagagaagaagatcttctgaagcaggtt
gagcacaaagcggggattacgtttaagcgtgtaggtgttccttctgctacagatgtaatt
aaagcttcaagtaacgatgccaaaaagttgttggaggccattcctccttctgcagtagac
tacttcagaaaatccgctcaagagcttatagacgaaaaaggggcggttgctgccctggct
gcagctctggcccatatttctggggcatcttacatacagcagcgctccttactcaactca
actgcgggttttgtgaccatggtgttaaagtgctcaatagaaatgcgtagcatgagctat
gcctggcgaggactaaaagatcagcttggtgaggaagtagatggcaaaatatctgcaatg
cgtttcctcaaggggaagatgggggtgtgctttgatatccctgttgatgaactgagtaac
atacaggaacagtggaaggacaccaggcgctggcagctgtcggtggcagaggaattgcct
gagctggaagagtcaccccaagaggccggacgagggttctccaggttcggaaatgggagg
caaagtgacggcggattcaagaggaacaactggtttaagaacggaaaccggggacgtgat
tttaacaagtcacttgattaa
DBGET
integrated database retrieval system
