Caloenas nicobarica (Nicobar pigeon): 135990726
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Entry
135990726 CDS
T11056
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135990726
03036 Chromosome and associated proteins [BR:
cnic03036
]
135990726
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135990726
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
Pre-60S particles
Helicases
135990726
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135990726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
LRIF1
Motif
Other DBs
NCBI-GeneID:
135990726
NCBI-ProteinID:
XP_065494795
LinkDB
All DBs
Position
7:34959964..34975541
Genome browser
AA seq
709 aa
AA seq
DB search
MPEATRVSASSGAESDPECPMESESALESSRRRRKKEKKEKKSKRHDKSRRRKAQTDESE
QSEEDVVPPKLKKSKSGVKQNGDVREESPENMRLSSLNVKSTHKKQHSNSSESSSGDGDS
EQEQEMTEEQKEGALSNFPISKGTVQLLQARGVTYLFPVQVKTFNPVYAGKDVIAQARTG
TGKTFSFAIPLIEKLQGDTQERRRGRSPKVLVLCPTRELANQVAKDFKDITRKLTVACFY
GGTPYNGQIDLMRSGIDILVGTPGRIKDHLQSGKLDLTKVKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVEH
LAIECHWSQRAAVIGDVIQVYSGSYGRTIVFCETKKEANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGTFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGICICFYQRKEEHQLRYVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPETAIEY
FKESARLLVQEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMSYA
WRRLRELLGDDVDRKVNRMCFLKGKMGVCFDIPAADRKDVEARWEDSKQWRLCVATELPE
LVESQRGGGGGGNSRSFSSSRNGRRGSSGGRNRFRGRGQKRSFDRAFDR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccacccgggtcagcgccagcagcggggccgagtcggatcccgagtgccct
atggagagcgagtccgccctggagagcagccggcggcggcgcaagaaggagaaaaaagag
aagaaatctaaacggcatgacaagtctcggaggagaaaggctcagacggatgaaagtgag
cagtcggaggaggacgttgttcccccaaaactcaagaaatccaagagtggagttaaacaa
aatggtgatgtaagagaagaaagcccagagaacatgagattatcttccttaaatgtgaaa
tccactcacaaaaaacagcacagtaactctagtgaatcgtcaagtggtgatggtgacagt
gagcaagagcaggagatgactgaagaacagaaagagggtgctttgtccaattttcctatt
tccaaagggactgttcagcttcttcaagctcgaggagtcacgtacctgtttcctgtgcaa
gtgaagaccttcaacccagtgtatgctggcaaagatgtcattgctcaagctcgaactgga
acagggaagacattctcttttgctattcccttaattgaaaagcttcagggagacacacag
gaaagaagaagaggccgttcaccaaaggtactagttctctgtccaacgagagagctggcg
aaccaggttgccaaagacttcaaagacatcacaagaaagctgacggtagcttgtttttat
ggaggaacaccatataatggacaaattgatctcatgagaagcggcattgacattttggtt
gggacacctggtcgaatcaaagaccatcttcagagtggcaagctggaccttaccaaggtg
aaacatgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaagtg
gaagacattttacgagttgcatacaagaaggattctgaagacaatccccagacgctgctg
ttttctgcaacttgcccacattgggtgtacgatgtagcgaagaaatacatgaagtcgaga
tatgaacagattgatcttattgggaaaagaactcaaaaggctgctacaacagtggaacat
ttggcaatagagtgtcactggtctcagagagctgcggtgattggagatgtcattcaggtc
tacagtggcagctacgggaggaccattgtcttttgtgagaccaaaaaggaggcaaatgaa
ctggctctgaatgcttcaatcaaacaggattgccagtcattgcatggtgacattcctcag
aagcaaagagagatcacactgaaaggtttcagaaacggtacattcaaagttctggttgca
actaacgtagctgcccgtggtttagatatccctgaagttgacctggttgtacaaagttca
ccaccaaaggatgtggagtcctatatccatcgttctggacgcacaggtcgagctggacgg
accgggatctgcatctgtttctatcagcgaaaggaggaacatcagttaagatatgtggaa
caaaaagcgggcattacgttcaagcgtgttggtgttcctactgcaacagatataataaag
gcttccagcaaagatgccatcaggtgtctggattctgttcctgaaactgctattgagtat
ttcaaagaatctgctcggttactagtacaagaaaagggaccagttaatgctctggctgca
gctctagcccatatttcaggtgctacttccattgaacagcgctccctgctgaactcagat
gcggggtttgttacaatgatactgcgctgctctgaagaaataaacaatatgagctacgct
tggcgaagactgcgagaactgttgggtgacgatgttgacaggaaggtgaacagaatgtgt
ttcctcaagggaaaaatgggagtgtgttttgatattcctgcagcagaccgaaaggacgta
gaggcgagatgggaagattcaaaacagtggcgtttgtgcgtggcgactgaattacctgaa
ttagtagaatcgcaacgaggaggaggaggtggaggaaacagccgaagcttctcgagctcc
aggaacgggcggcgtgggagctccggtggtagaaacagattcagaggcagaggccagaaa
cgaagttttgacagagcctttgatcgttaa
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