KEGG   Caloenas nicobarica (Nicobar pigeon): 135990752
Entry
135990752         CDS       T11056                                 
Name
(RefSeq) opsin-VA-like
  KO
K04256  c-opsin
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cnic01009]
    135990752
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:cnic04030]
    135990752
Protein phosphatases and associated proteins [BR:cnic01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     135990752
G protein-coupled receptors [BR:cnic04030]
 Rhodopsin family
  Vision
   Opsin
    135990752
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7TM_GPCR_Srw 7TM_GPCR_Srsx 7tm_4
Other DBs
NCBI-GeneID: 135990752
NCBI-ProteinID: XP_065494844
LinkDB
Position
7:complement(213398..218600)
AA seq 386 aa
MDAFRAPENESLLSSSSGPGRWDPFCCPLDSIQPWHFRLLAAVMLVVTSLSLAENLAVIL
VTFKFKQLRQPVNYVIVNLSVADFLVSLTGGTISFLTNLKGYFYMGYWACVLEGFAVTFF
GIVALWSLALLAFERYIVICRPLGNVRLRGKHAALGIAFVWAFSFLWTVPPTMGWSSYTT
SKIGTTCEPNWYSGAYTDHTYIIAFFTTCFIVPLLVILVSYGKLMRKLRKVSETQGRLGT
TRKPERQVAGMVVVMIVAFLICWMPYAAFSILVTAYPSIELDPRLAAIPAFVSKTATVYN
PIIYVFMNKQFRKCLIQMFSCSAIETAESNMNPTSERAMLTQDKRGSEMSTMAVRSTLSK
RKTGDEHRNCRSFAQLSISENKICPL
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggatgcattcagagcacctgaaaatgagtcgctgttgtccagttcctctggtccaggc
agatgggatcccttctgttgtcccttggactccatccagccctggcacttcaggcttctg
gcagcagtcatgttggtggtgacctccctatcgcttgctgagaacctggctgtcatcctg
gtaacttttaagttcaagcaattgagacaacctgtcaattatgttatagtcaatttgtct
gtggctgatttcctggtctcactgactggtggcaccatcagctttttaaccaatctaaaa
ggttatttttatatgggatactgggcttgtgtactggaaggatttgctgtcacatttttt
ggcatcgttgctctctggtctcttgctctgttggcttttgagcggtacattgtgatctgc
cgcccattgggaaatgtgcgcttgaggggaaagcacgcagccctaggtattgccttcgtg
tgggccttttccttcctttggaccgttccaccaacaatgggttggagcagttacacgacc
agtaaaattggaactacttgtgagcctaactggtactcaggagcttataccgaccatacg
tacattattgcattcttcaccacctgtttcattgtgcctttattagtgattttggtatcc
tatggaaaactgatgcggaagctaaggaaggtgtcagagacacagggcaggctgggaact
acaaggaaacctgaaagacaagtggctggaatggtcgttgttatgatcgttgcctttcta
atctgctggatgccgtacgctgccttttctatcttagtcactgcatacccctccatcgag
ctggatcctcgtctggcagcaattccagctttcgtctccaaaacagctactgtttataat
ccaattatttatgtctttatgaacaaacagttcaggaagtgtctgattcagatgttcagc
tgtagtgccatagaaactgcagagtccaacatgaacccgacttcagagagagcaatgcta
acccaggacaagagaggcagtgagatgtccaccatggcagtgcgtagcaccctttctaag
aggaaaactggagatgaacacagaaattgccgatcttttgctcagttgtcaatttcagaa
aataaaatctgtcccctatag

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