Caloenas nicobarica (Nicobar pigeon): 135990794
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Entry
135990794 CDS
T11056
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135990794 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135990794 (KCNMA1)
Ion channels [BR:
cnic04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135990794 (KCNMA1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
135990794
NCBI-ProteinID:
XP_065494912
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All DBs
Position
7:complement(24873823..25342612)
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AA seq
1310 aa
AA seq
DB search
MANGSGGGGGSYPGGSGGGGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCD
SRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGGDTQAD
GACKPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDS
SNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVF
VSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIH
LVENSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAM
FASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVE
IVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPD
AEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFI
AQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVC
ELVFAKLKLLMIAIEYKSEKRESSILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKA
CHDDITDPKRIKKCGCKRQVKNAARSSYPKCSYQFKNATTSALVGAKSTEGILEPVPLVN
NRKGSLFLPNNPSLLDLNLLSSVEQGKSTYCSLQRAHSLPVKYHYHAQKPGLNQDLLEDE
QPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQIDNMDANVKKYDSTGMFHWCP
AKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKHIVF
VGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQ
DKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQPSITTGANI
PIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTL
IRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCY
GDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFD
HNAGQSRASLSHSSHSSYSSSKKSASVHSIPSTANRPNRTKTRDSREKQNATRMNRMGQA
EKKWFTDEPDNAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggcggcggctcctacccgggcggcagcggcggcggcggc
attagaatgagtaacaatatcaacgccaacaatctcaacacagactcgtcctcctccccc
gtcaatgtgcccaagatggatgcgctgatcatcccggtgaccatggaggtgccctgcgat
agccgcggacagcgcatgtggtgggctttcctcgcctcatccatggtcactttctttggg
ggactgtttatcatcctgctgtggaggaccctcaagtacctgtggactgtctgctgccac
tgcggggtcaaaaacaaggaggcccagaagatcaatggtggtggggatacacaggcagat
ggggcctgcaaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatg
acctctgtgaaggactgggcaggagtcatgatatctgcccagacgttaactggcagagta
cttgttgtcttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcg
tcaaacccaatagaatcctgccagaatttctacaaagatttcacattacagatcgacatg
gcattcaatgtgttcttcctactctacttcggcttgcgtttcatagcagccaatgacaag
ctatggttttggctagaagttaattcagtagtagatttcttcacagtccctccagtgttt
gtgtcagtatatttaaacagaagttggcttggtttaagatttttaagagcccttagactg
attcagttttcagaaattttgcagtttctgaatattcttaaaacaagtaattccatcaag
ctagtgaatctgtgctctatatttatcagcacgtggctgacagcagctgggttcatacat
ttggtggagaactcaggggatccatgggaaaatttccaaaataatcagccgctaacgtat
tgggaatgtgtttatttactgatggttacaatgtccactgtgggctacggagatgtttat
gcaaaaacaacccttggtcgccttttcatggtcttcttcatccttgggggattggccatg
tttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggt
tcctatagtgcggttagtggaagaaagcacatagttgtctgtggtcacataacacttgaa
agtgtgtccaacttcctgaaggacttcctgcacaaggatagggatgatgtcaacgtagaa
atcgtctttctgcataatatctcccctaatcttgagctggaagctctttttaaacgacac
ttcactcaggtggaattttatcagggttcagtccttaatccccatgacctggcgagagtg
aagatagagtcagcagatgcgtgcctaatccttgccaataaatactgcgctgacccagat
gctgaagatgcctccaatattatgagagttatttcaataaagaattatcatccgaagata
agaattatcactcagatgttgcagtatcacaataaggctcacctgctaaatatcccaagc
tggaactggaaagaaggggatgatgcaatctgtcttgctgagctcaagctgggtttcata
gcccagagctgcctggcaccgggcctttcaacaatgttagccaacctcttctctatgaga
tcattcataaagattgaagaggatacgtggcagaaatactacctggaaggagttgcaaat
gaaatgtatacagagtatctgtctagtgcctttgtgggtttgtcattccctgcagtttgt
gaactggtgtttgcgaaactaaagctcttaatgatagccatagaatacaagtcggaaaaa
cgagaaagcagtatattaatcaatcctggaaaccacgtcaagattcaagaaggtacatta
ggattcttcattgcaagtgatgccaaagaagtaaaaagggcatttttttactgcaaggcc
tgtcatgatgacatcacggatcccaaaaggataaaaaaatgtggctgcaaacggcaagta
aagaatgcagctagatcaagttacccaaaatgttcatatcagttcaagaatgcaactact
agtgcattggttggtgccaagtccactgaaggaatcctggaacctgttccacttgttaat
aatcgtaaagggagcctcttcctacccaacaacccctcgctgctggaccttaacttattg
agttctgttgaacaaggaaaatctacgtactgtagcttgcaaagggcacacagcttgcct
gtaaaataccactaccacgcccaaaagcctgggttgaaccaagatctccttgaagatgag
cagccgtcaacactatcacccaaaaaaaagcagcgaaatggaggcatgcgaaattcaccc
aactcctcacccaaattgatgaggcatgaccccttgttaattcctggcaacgagcagatt
gacaatatggatgccaatgtgaaaaaatatgactctacagggatgtttcattggtgtcca
gccaaggacattgaaaaggtcattttgactcgaagtgaagcagcgatgacagttttaagt
gggcatgtagtcgtttgcatatttggggatgttaaatctgctttgattggattaagaaat
ttagtgatgcctttacgagccagcaactttcactaccatgaactcaagcacattgtgttt
gtgggttcacttgaatacctgagaagggaatgggagacactgcataacttccccaaggtt
tcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatcaacctc
tgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcgctgcag
gacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcatt
ggggtcttgcaggctaattcccaaggctttacaccccctgggatggataggtcatctcca
gacaacagtccagtccatggcctgttacgtcaaccctccattacaacaggagccaacatc
cctattataacagagctagtaaatgattcaaatgttcaattcttggaccaagatgacgac
gatgacccagacacagaactgtatctcacgcagccctttgcatgtggaaccgcatttgct
gtcagcgtcctggactctctcatgagcgcaacatacttcaatgacaatatcctcacactg
atacggacattggtaacaggaggagccacaccagagctggaagcactgattgctgaggaa
aatgcattgagaggaggttacagcacgccccagacacttgcaaacagggacaggtgtcga
gttgctcagttggctttgtatgatgggccctttgcagacctaggggatggaggttgttat
ggagatctattttgtaaagcactgaaaacatacaatatgctttgctttggaatttatcga
ttaagggatgcacatctaagcactcccagccaatgcactaaacgttatgttatcacaaac
cccccatatgaatttgagctcgtgccgacagacttgatcttctgtttgatgcaatttgac
cacaatgctggccagtcccgggccagtctttctcattcctcccattcctcctattcttcc
agcaagaagagtgcatcagttcactccatcccatcaacagcaaaccgaccgaaccgcacc
aagaccagggattcccgggaaaaacagaatgcaacaaggatgaatagaatgggccaagca
gaaaagaaatggtttacagatgagccggataatgcctatcccagaaacattcaaatcaag
cccatgagcactcacatggccaatcagatcaatcaatataaatcaacaagcagcttgata
ccaccaatcagagaagttgaagatgaatgttga
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