Caloenas nicobarica (Nicobar pigeon): 135990875
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Entry
135990875 CDS
T11056
Symbol
WDFY4
Name
(RefSeq) WD repeat- and FYVE domain-containing protein 4
KO
K24777
WD repeat and FYVE domain-containing protein 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135990875 (WDFY4)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Other autophagy associated proteins
Others
135990875 (WDFY4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
WD40
PH_BEACH
Arm_4
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
NBCH_WD40
DUF4704
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WDR55
Laminin_G_3
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
135990875
NCBI-ProteinID:
XP_065495064
LinkDB
All DBs
Position
7:18843748..18992435
Genome browser
AA seq
3196 aa
AA seq
DB search
MEEAAERTWQLEDLPGKAGQQEQSPDDGDEAEVPGQPAHSKDKPPQSPALQWETLGRQFV
EYEQMAPFLVPEEQQRRLLDFLPLFLKTWEESAGVMVFPNIQLLASEVSKLLTKEIKRNL
NGKPAEEARLALEQLLQQKGEAEDGRLLLKSVYLLSQTDLRITWNIIRSGLPAALMQCLY
LFFTFPLKKTSDDGEASEDDSQTQEMLVKIMLNMYREEQGVEELLAADKLQSLIIATATL
WDQCSHSWKVPTGRVLRTISKAQTKNSIVYLQAVDCIKITVQNLFKLADTLPACDVCEAA
SIVLCFVKDSYPISSALLTEFENNDGYQLLLKILLRCEGLQQNEGDSYLDEILDMLTCLT
TCGKTELKVSGNIVHPQLPHFDFEWTKSSGMTVKNLQAFQVLQSIFQKSNDQHLCGRILT
AIGTIWAWDTVNFFLLEWTLQPINKFTDIIHFKPHPVQVQFFRLVESIVLDLSYVPHEIL
KKVQYLIKENIVPFCTLTALRCLLSMTKKDLLFSDIFRDSGLLGLLLALLRKQAKILRKS
AGTHLPGLEEGTEKELNAVMLKMVAALTVGSVRNTVVLKDYGMVPYIKIFLDDECYRSAT
LSILEQLSVLNYEEYMSIIIGALCSSTQGELHLKLDLLKSLLKILESPKSHSAFRMCSGF
NGLLSLLSDMEGALQDPPSGLWAAVGQNCILELVFYTLQGITAALHLDPVNSNFFQKNGL
FEKMAEDLGSLGCFWTQREWQIPLSLEKTRTFTEFLDAAFCSSEPFPMWLKNCIWILNFL
DHMVKGTLHLESYFKERKTETGEASRDDQEAPQAQEEHPVAFNRPGNKLSVSAYRLWGNP
EEKWETGDCTIVHPGAVCVMVRLLPKLYNEGHAQLSQEIQCAVVGHIQSLVKSEKSRQVI
CGSGLLSTIITTCQDAFRNESHPLHLPLTRVFEKLASQAIEPDVLRQFLWLGGSPPLPSR
TSTNKTQALSCQGSDSANAAWNEGSEEDMVDNKTDRHTVVPVSSSPWVSKGSALALQTAM
SLISMTSPRNFQLRSTALPPSFVEFDMSMEGYGCLYLPTLATVMGPSAEQSVSGGIGMGT
RMFPPSSGLTLSCWFLVSRFGLVHNSHPLRFLTVVRHMSRTEQEFVCFSVSFFPQDRSLV
ISTEEVEFQPLDIMEPEGEVLSSSPFPRQVQFDCGKLLVTGQWHHLTVTIAKEAKKNCIV
SAYINGQMIGSAKMQYLQPLPGSCISMEPSSFIDVYGYIATPRIWKQKSSLIWRLGPTYL
FEEAITVETMGMINKLGPQYCSNFQAVQLQDEDKYSDHNPTPLVAEEKISFGINAVCSSL
TTVQDIKSSYNEVDGRLIAKEIGINSRDSSTPIFLVKNIAGHLSGSLRTIGSVAVGQYGV
RVFQSSPAATSLNFIGGPAILLGLIAMACDDHTMYAAVKVLNSILNSSPMSEKLMRHMHG
YQVLTYLLKRKTQLLNNRILQLMFSLVGTAELGFESSVIKNYSAFHYILCNFELWVKAPE
NLDLALFSHLKEILQSSRHGCQNAAVAYQVQMVPKLIFLFNDPEISNSRITVACTILSHL
LQGYFNTRDVLRIGLFLVYTLKPSSVDENQICLDSVAEMPDEALSQTSGKTIWLRNQLLK
MLLDVLCSDKLHLSSEEQEETFLALGPDWFLLFTQSYLHSSTAVLGIKLLLCFLHNRLLL
NKFKEGIVAGRWLENSSAGLSILMDNLKSQPAVPDNGSFLISGFSVLQRCLMDHVHIPEI
YLLVSGLFLATPQSEPPEAAKKDLESMLQWILQHHLTENVLKIGLCAEAAVLLLEMVRVT
VDKPIADAEGSWEIAYPGNVIQFLCLIYHSYTQDPMWHCPDFLKTLAMVVFHSGPPKGTS
EGLLSPTGPAVAEGKGCVDHSSLPLLPHPAKKQVWDFVQVLLVDSLLNIPATKQGHPLEL
LLEVSPEDATSEQKRHFQTKLLLSAMDVFHVNSQGERKTRPRGSSDPHGTSETAAPVSMM
NIAYFAQKLVEKLNSGMFAADPKQILLFTAKQIMGVSESPVSQKEVFLNALYSCLNRAIL
HCLSRPQQSLPEQFNVLNTLNVLQEQWDIIFATYNSNNNFIVCLMYCLCQLNSGSYPEGF
GIDAKPKLASYHQIFLAPSEDEEGSLPTPDDVHQEILRTVEIIWKQLVSQRRQALEDTYK
MDLSVKGNDKERDMKITEITPLWEEIMTKAWQHLIASEKKILQSKAGPGLSQSKHNSWSE
SLSSAIRLVPGRNTKEMTCKSEGFVSCMERYRRTGQELYASLYKNHVQMLQCGYSKAAKD
WMTLEEQLFYRRSPWGDATQSSDPRWILDCYEGPSRMRRRIQHVNTRVTMMRMKSEFLLA
NRNETTPPAEVNPGDLTLNAAEREMDKKGSDHDQLTFFPALHESFHSEDFLELCVERQII
LQEFAESEKVTFKCSVAVVQGHTTLEGVLLFGKEHFYICECFVLSPLEEVYCTRHCLSSI
SDPFIFNLCHKDHAVGDQMCSRYSYNDIKEIHLMRFLLQEIALEIFLKNGYSRFLVFHDS
DRNKIFKRFCSFQPALKSKGITEESLNIRKNSGGEKTMLQKWQKREISNFDYLMYLNTLA
GRSYNDYMQYPVFPWVLADYHSETLNLTNPHTFRDLSKPMGAQTMERKRKFIQRYNEVEK
SEGDLSAQCHYCTHYSSAIIVASYLVRLEPFTQTFCSLQGGSFDVADRMFHSVKSTWESA
SRDNMSDVRELIPEFFYLPEFLTNANHFELGCMQDGTVLGDVQLPPWADGDPHKFILLHR
QALESDYVSAHLHRWIDLIFGHKQHGSAAVEAVNTYHPYFYGDKMDLNKIKDPLIKSTIL
GFISNFGQIPKQLFTKPHPSRNAQGKSSSGKETVLSLHSSGILPPFVSSLQNLKLSPVTI
KDNPKGPIGHIVYTEKGILAVEKNKVLIPPLWSKTFCWGFEDFTCCFRNYGSEKNVTTFE
CMADWGKCLCAVCPSATTIITSGTSSVVCVWEISLVKDKVKHLNLRQALYGHTQAVTCLA
ASVTYSIFVSGSDDRTCIIWDLNRLTYINQLPAHGASLCSVAINNSTSDIISCAGSYLYL
WTVNGQLLASINTSCSPERCIVCCCFAEVMDWDTRSIIITGSSDGVVRLWKTEYTNTPEQ
AAGLRLQRGMMEEPGNMGNKHGKRFVLCRELNPNLALTGKPSKTSPAVTALAVSRNSSKL
LVGDDWGRICCWSMDE
NT seq
9591 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcagctgaacgcacatggcagctggaggatttacctggcaaagcagggcag
caagagcaaagccctgatgatggagacgaagcagaagtgcccggacagcctgcacacagc
aaggacaagccaccccagagccctgctctccagtgggagactctgggcagacagtttgta
gagtatgagcagatggctccatttctcgttccagaagagcaacagagaaggttgctggac
tttcttcccctcttcttaaagacctgggaagaatctgctggagtaatggtattccccaac
attcagctgttagccagtgaggtttccaagcttctgacaaaggaaattaagaggaacctc
aatggcaaacctgcagaggaagctcgtctggctttggagcaactgctacaacagaaaggt
gaagcagaagatggccgtttgctcctgaaatcagtgtatctgctctcacagactgacttg
agaattacgtggaacatcattagatctggccttccagctgctctgatgcagtgcctgtac
cttttctttacttttcctctgaagaaaaccagtgatgatggagaggcaagtgaagatgac
agtcaaactcaagaaatgcttgttaagataatgcttaacatgtacagagaggaacaaggt
gtagaggaacttctggcagctgataagcttcagtcattaattatagcaactgctaccctc
tgggaccagtgtagccactcatggaaagtacctacaggccgtgtgctgcgaacaatttca
aaggctcagacgaaaaacagcattgtgtacctacaagctgtggactgcattaaaataact
gttcagaatctctttaaactggctgataccctacctgcttgtgatgtatgtgaagctgct
agcattgtcttgtgctttgtgaaagattcctaccccatatcatcagctttattgacggag
tttgaaaataatgatggctaccaacttctgctaaaaattttactccgatgtgaggggttg
cagcaaaatgaaggagactcctatctggatgagatcttggacatgctgacttgccttaca
acttgtggaaaaactgaactgaaagtttctggcaatattgtacatccgcaattaccgcac
tttgattttgaatggacaaagtcttctggaatgacagtgaagaatctccaggcttttcag
gtgttgcagtccattttccagaaaagtaatgatcagcacctgtgtggaagaatcttgaca
gctattggtaccatatgggcctgggacaccgtgaacttctttcttctagaatggacacta
caacctatcaacaagtttactgacataatccatttcaaaccacatccagtccaagtccag
ttcttcagactggtggagtccatagtgctagacctgtcctatgtcccccatgaaattttg
aagaaggttcagtatttgataaaggaaaacatagtgccattctgcaccctaacagctctc
cggtgccttctcagcatgaccaagaaggacctgttattcagtgacatattccgtgactct
gggctcttagggctactgctggcacttttgaggaagcaagccaagatcctgaggaagtca
gctggaacacatctgcctggtctggaagaaggcactgagaaggaattaaatgctgtgatg
ctgaagatggtagctgcccttacagtgggttccgtgaggaacactgttgttctgaaggac
tatggaatggtgccatatatcaagatatttttggatgatgaatgttacaggagtgctact
ctcagcatcttggagcagctgtcagtcctcaactatgaagaatatatgagcattattatt
ggggccctctgttcttctacacaaggggaactacatctgaaactagatctgctgaagtca
ctcctgaagatactggagagtcccaagagccattcagctttcagaatgtgcagtggattc
aatggactcctgtcccttctctcagacatggaaggtgcattgcaggaccctccatctggg
ctgtgggcagcagtaggacagaattgcatactggaacttgttttctacacacttcagggg
ataacagcagccctgcacctggaccctgtcaacagcaacttcttccagaagaatggtctc
tttgaaaagatggcagaggatcttgggtcactgggatgcttctggacacaacgggaatgg
caaattcctctgagccttgaaaagacaaggacatttacagaattcttagatgcagctttc
tgctcttcagaacctttcccaatgtggctaaagaactgcatatggattctgaattttctt
gatcacatggtcaaaggaaccctccatctggagagctacttcaaggagagaaagacagag
acaggagaggcatcaagagatgatcaagaggcaccccaagctcaagaagagcatcccgtt
gctttcaacaggccaggcaacaaattatctgtctctgcctataggctatggggaaaccct
gaagagaaatgggaaacaggagactgtaccattgtacatcctggtgctgtctgtgttatg
gtgaggttgctgccaaagctgtacaatgagggacatgctcagctttcacaggaaatccaa
tgtgctgtggttggtcatatccagtccctcgtgaagtcagagaagagtcgccaggtgatc
tgtggatctggcttgctgagcaccatcataactacctgtcaggatgccttccgcaatgag
agccatccgctgcatctgcccctcactagagtgtttgagaagcttgcatctcaggctatt
gagccagatgtgttaaggcaatttctttggttgggaggttctccaccactaccttccagg
accagcacaaacaagacacaggctctttcctgtcagggaagtgattctgctaatgcagct
tggaatgaaggttcagaagaggacatggtggacaataaaactgatcgtcacacagttgtg
cctgtcagcagctctccctgggtgtccaagggatctgcattggcactccagactgcaatg
agtctcatctccatgacgtcacctcgaaacttccagctccgtagcactgctttacctcca
tcgtttgtggagtttgacatgtccatggaaggatacgggtgtttatacctccctaccttg
gccactgtcatgggacccagtgcagagcaatctgtttcaggaggaattggcatgggcacc
agaatgttccctccgtcaagtggcctgactctttcctgctggtttctggttagcaggttt
ggtttggtgcacaacagtcacccacttcgtttcctcacagttgtgaggcacatgtcaaga
acagagcaagaatttgtttgcttttcagtaagcttcttcccgcaggaccgttctttagtc
atttccacagaagaagtggaattccagccgcttgatattatggaacctgaaggtgaggtc
ctaagttcctccccatttcccaggcaagtccagtttgactgtggcaagctgctggtcact
ggccagtggcatcatctcacagtgacaattgctaaggaagcaaagaagaactgcattgtg
tcagcttatattaatggtcagatgattggctctgcaaagatgcagtacctccagccttta
ccaggtagctgtatttctatggaaccctcttcctttattgatgtctacgggtatatagct
acacctcgaatttggaaacagaagtcctccttgatctggcgcctcggccctacatatttg
tttgaagaagccatcactgtggaaaccatggggatgattaataagcttggcccacagtat
tgtagcaatttccaagcagtacagcttcaagatgaggacaagtacagtgatcataatcct
acacctctggtcgcagaagagaagatttcatttggaatcaatgctgtatgctcatctctc
actacagtccaagatataaagagctcctacaatgaagtggatggccggctgattgccaaa
gagattgggattaactctcgggacagttcaactccaatattcctagttaagaatattgct
ggacacctgtcaggttccttgcgaactattggatcagttgctgtgggccaatatggggta
agagtgttccagtcttctccagcagctactagcctgaacttcattggaggccctgctatt
ctcctgggtctcattgctatggcctgtgatgaccacaccatgtatgcagctgtgaaagtc
ctgaactccatcctgaacagcagcccaatgagtgaaaaattgatgaggcatatgcatgga
taccaggtgctgacctatctgctgaagaggaagacacagctgttgaacaacaggattttg
cagttaatgttctccttagtgggcacagctgagcttggctttgagtcttcagtcatcaag
aattatagtgcattccattacattctgtgcaactttgagctttgggtgaaagcaccagaa
aatcttgaccttgctcttttttcacatcttaaggagatcttgcagtcctccagacatgga
tgtcagaatgctgcagttgcctaccaggtgcaaatggtgcccaagctcattttcctcttc
aatgatcctgaaatcagtaactccaggatcactgtggcttgcactatcctctcccatttg
ttgcaaggatactttaacacaagagatgttctcaggattggactgttccttgtttacact
ttgaaaccttcttctgtggatgaaaatcagatttgcctggacagtgtggctgagatgcct
gacgaagccttaagccaaacatctggaaagacaatctggcttcgaaaccagttactgaaa
atgctgttagatgtactgtgctcagacaaacttcatctgtcctctgaggaacaagaagag
acatttttggcactggggccagactggtttctgctcttcacacagagctacctgcactct
agcacagctgtgcttggaatcaaactacttctgtgcttcctccacaatcgtttgctgctg
aacaaattcaaggaggggattgtggctgggcgctggctggaaaacagctctgcagggttg
agtattctaatggataatttaaaatctcagcctgcagtgcctgacaatggctccttcttg
atttctgggttttctgtgttgcaaagatgcctgatggatcatgtccacatccccgagatc
tacttgcttgtgtcagggctctttctggcaactccacagtctgaaccacctgaagcagcc
aagaaagatcttgaatctatgttgcagtggatcttgcagcaccaccttacagagaatgtt
ctcaaaattgggttgtgtgcagaggcagctgttttattgctggaaatggttagagtcact
gtggataagcctattgcagatgcagaaggttcctgggagatcgcctatcccgggaatgtt
atccagtttctgtgcttgatctatcacagttatactcaggaccccatgtggcactgtcct
gacttcttgaaaactttggctatggttgttttccattctggaccacccaagggaacctct
gaaggtcttttgtctcctaccggtccagctgttgctgaagggaaaggctgtgttgatcac
tcttctctcccactcctgccacatcctgccaagaaacaagtgtgggattttgtgcaagtt
ctcctggtggacagtcttctcaacatcccagcaaccaaacaagggcatccacttgagctg
cttcttgaggtttctccagaggatgccaccagtgagcagaagagacattttcagacaaaa
cttctgctgtctgctatggatgttttccatgtcaacagccaaggcgagaggaaaacaaga
ccaagagggagcagtgatcctcatggcacttcagaaacagctgcacctgtatccatgatg
aatattgcttattttgctcagaagctggttgagaagctgaacagtggaatgtttgctgct
gaccccaagcaaatcctgctcttcactgccaaacagattatgggggtctcagaaagccct
gtttctcagaaggaagttttcctcaatgccctgtacagctgtttaaacagagccatccta
cactgcctatccagaccacaacaatcgctgcctgaacagtttaatgttctgaatactctc
aacgtcctgcaggagcaatgggacattatttttgcaacttacaactcaaataataatttt
attgtctgccttatgtactgcctttgccaactgaattcgggcagctatccagaaggtttt
gggatagatgcaaaaccaaagctggcttcatatcaccaaattttccttgcacccagtgaa
gacgaagagggcagcctgcctactccagatgatgtccatcaggagattttgagaacagta
gaaatcatctggaagcagctcgtttctcagaggcggcaggctctggaggacacttacaag
atggatctttctgtaaaaggaaatgacaaagaaagggacatgaagataacggagatcact
cctttgtgggaagaaattatgacaaaagcttggcaacacttgatagcatctgaaaagaag
attctccagagtaaagcagggccaggcctgtcacagagcaagcacaattcctggagcgaa
agcctctcctcagctattaggttggtgcctggccgaaacacaaaggaaatgacatgcaaa
tctgagggatttgtgtcatgtatggaacggtaccgaagaactgggcaggagttgtatgcc
tctttgtacaagaaccatgtacagatgctgcagtgtggttacagcaaagcagccaaggac
tggatgacacttgaggagcaacttttctacagaaggagcccgtggggagatgcaacacaa
tcctcagacccacgatggattcttgattgttatgaagggccttcacgaatgaggaggagg
attcagcatgtgaacacccgagtgacaatgatgcgaatgaagagtgagtttctcctagca
aacagaaatgaaacaactcctcctgctgaagtgaatccaggagacctgacattaaatgca
gcagaaagggagatggataagaagggatcagatcatgaccagctaacattcttccctgct
ctacatgaaagtttccattcagaagacttcttggaactgtgtgtggagagacaaattata
ttgcaggagtttgcagagagtgaaaaggtcacatttaagtgctctgtggcagttgtacag
gggcatacaacgttggaaggagtgctactctttggcaaagagcacttttacatctgtgag
tgctttgtgttgtctcctctagaagaagtctactgtacacgtcactgcttgtccagcatt
agtgatccatttattttcaacttatgtcataaagatcatgctgtgggagaccaaatgtgt
tcccgttattcatataatgatataaaagagattcatctgatgcgctttcttctgcaggag
attgccttggaaatattcctcaaaaatggttactccagatttcttgtcttccatgacagt
gaccgaaataagatatttaagagattttgctctttccaacctgctttgaagtcaaagggg
ataacagaagagtccctgaatataaggaagaactcaggaggggaaaagacaatgcttcag
aagtggcagaagagggagatcagcaactttgattacctcatgtacctgaacacactggct
ggccgcagctacaatgattacatgcagtatcctgtatttccatgggtcctcgctgactat
cactccgagactctcaaccttactaatcctcatacatttcgggacttgtcaaagcccatg
ggagcacagactatggagaggaaacgcaagttcatccagcgctacaatgaggtggagaag
agtgagggagacctgtcagcccagtgtcattactgtactcactattcatcagcaattata
gtggcatcttacctggtccgattggagccatttacccagacgttctgttccctgcagggt
gggagctttgatgttgcagacagaatgtttcacagcgtcaagagcacatgggaatcagca
tcaagggacaacatgagtgatgtcagggaactcatccctgaattcttctacttgccagag
ttcctaaccaatgcaaatcactttgaacttggctgcatgcaggatggaacagttctggga
gatgtgcagcttcctccctgggcagatggggatcctcataagtttattctcctgcacaga
caggcgttggaaagtgactatgtaagtgcacacctccatcgctggatagatctgattttt
ggccacaaacaacatggctcagctgctgtggaggcagttaacacctatcacccatacttc
tatggagacaagatggacctcaacaaaattaaagatcctctgattaagagcaccatcctg
ggttttatcagcaacttcggacagataccaaagcagctcttcactaaaccacatccatcc
aggaatgcccaaggaaaaagttcatcaggaaaagagactgtgctgtcccttcactcaagt
ggaattcttcctccttttgtgagcagcctgcaaaatctgaagctctcaccagttacaata
aaagacaatcccaagggacctattgggcacattgtttatactgagaaaggtatcctggct
gttgaaaaaaataaagttttgattcctcctctttggagcaaaacattctgctggggattt
gaggacttcacctgctgctttcgcaactatgggtctgagaagaacgtgactacatttgag
tgcatggcagactggggaaaatgcctctgcgctgtgtgtccttcagcaactaccataatc
acatctggaacaagctcggttgtgtgtgtctgggaaatttccttggtcaaggacaaagtg
aaacatctaaacttgaggcaggctttgtacggccacactcaggcagtgacctgccttgct
gcatctgtgacctacagcatctttgtgagtggatccgatgacagaacctgcatcatttgg
gacctgaaccggctgacgtacataaaccagcttcctgcccatggggcaagcctctgttct
gttgccatcaacaattcaacaagtgatattatctcttgtgctggctcttacctgtatctg
tggacagttaatggtcagcttcttgcaagcattaacacctcctgcagccctgaacgctgt
attgtttgctgctgctttgctgaagtgatggactgggacacacgcagcatcatcatcaca
ggaagctcagatggagtggtgaggctgtggaaaactgaatacaccaataccccagagcaa
gctgctggactgaggctgcagaggggcatgatggaagagccgggcaacatgggtaacaag
catggaaaacgttttgttctttgtcgggaactgaatcccaaccttgccttgactggaaaa
ccaagcaagaccagcccagcagtgacagcactggctgtatccagaaattcctctaagctc
ctagttggtgatgactggggaagaatctgctgctggtctatggatgagtag
DBGET
integrated database retrieval system
