Caloenas nicobarica (Nicobar pigeon): 135990895
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Entry
135990895 CDS
T11056
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135990895 (RRP12)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
Other 90S particles
135990895 (RRP12)
Pre-60S particles
Other pre-60S particles
135990895 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
135990895
NCBI-ProteinID:
XP_065495095
LinkDB
All DBs
Position
7:complement(15414117..15428250)
Genome browser
AA seq
1296 aa
AA seq
DB search
MARSGRLRSGAAAKLKRWRKGHSSDCNPETRQHRLAARSRFCSRPAEKSNLTVDAVKLHN
ELQSGSLRLERPSDSAQLRMEEDDAGEGATEKSSGTFLSGLSDCTNVTFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTLEAVESPESLAAVAYLLNLVLKRV
PSPVLIKKFSDASKAFMSIVSSQACSSSTSALRWILSCLATLLRKQDLAAWSYPVTLQVY
HGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDTAPEHHPAAPSTAKFCVQEIEKAGG
TKEATTTLHVLALLRDLLPCFPAAVVKTCCETLLRVMTLSHVLVTACAMQAFHSLFSAQA
SVACLPAELNAQIITALYDYVPSTSDLQPLLTWLSTMEQAHVNLGRLQKDLCWAHLPRLF
AAAMNCFLSPHSQVVSAAAQTLETLLSECVAPHVDDLGTVSASAPAPAAFLCKMFKSVEE
GLTYRFLAAWGEVLRVLEVFFETCGKQCHPIMRKCLRSLCDLRLSPHFPHTTEVDQAVGA
AVSAMGPEVLLEAVPLEIDGKEETLDFPRSWLLPVLRDYVQGARLGFFTSYFLPLAATLK
SRAVEFTQAGKSMEAKIYDTLQWQVWTLLPGFCTHPTDVLGAFKGLARTLGMAISERPDL
RPTVCQALRTLIRKGCQTDAERAEVGRFAKNFLPILFNVYSQAEEDAGSNAQRRSVLDTV
RAYLTITDAQMVCGFLQKASEKLTSPESSEFTRLSILDLVVAMAPYADEPSLGSLYRTIQ
PSLQSKEHSMQKKAYRVLEEVCAAPHGPCQAFVRSHLRDLQTALLDSLKSAASPAKRPRL
KCLFHIVKQLSAEHEPFITALVPEVILCTKEVSVGARKNAFVLLVEMGHAVIRFGPTPQE
AMERFLLLVYAGLTGSVTMISCTVLALTRLFFEFKDHLELSVVEQLLQNVCLLLASRTRD
VVKAALGFLKVVLLLLDTKLLAKHVQAMLEALGNLSDDMRRHFRMKLRNLFTKFIRKFGF
ELVKGLLPVEYHKVLVNIRKAEARSRKQRALRQAAADTDEEQAPPAQPRGDSMEEILADS
EDEEEEEEEWQRSSKERRKQARQKGQAWLKEGEEDEPLNFLDPNVSQRVLATKPGPSRSR
GVSHDFQMSEDGRLIIHEEEEEIDDAEAKGVDEEMADVLQDVGLCSKKSQKRRFREEQED
EEPEAGTYPQYRAGGSGIHRQLDKQPAFGAEYRSKKGKGDVKKKGQLDPYAYIPLNRAKL
NRRKRAKMQGQFKGLMKGAQRGAKAGRRNRLKAQRP
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcgggcggctccgctctggcgctgccgccaagctgaagcggtggcggaag
ggccacagcagcgactgcaaccccgagacccgccagcaccgcctggccgcccgtagccgc
ttctgcagccggcccgcggagaaaagcaacttaacggtggatgcagtgaagctgcacaat
gagctgcagtcggggtccctgcgtttggagcgaccaagtgacagcgctcagctccgtatg
gaggaggacgatgctggggaaggtgccacagagaagtcctctggcaccttcctgagcggg
ctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggagtccaactct
gctgctcacaaagagatctgcgctgtgctggcagccgtgacggaggtgatccgctcacgg
gggggcaaggagagcgagacggagtattttgctgcgctgatgaccacactggaggccgtg
gagtcccccgagtcacttgctgctgttgcctacctgctcaacctcgtcctaaagcgggtc
ccaagccctgtgctcataaaaaagttctcagatgcctcgaaagccttcatgagtatcgtc
tcctcacaggcctgcagcagctccacctcagccctgcgatggatcctctcctgcctagcc
acgctgctgcggaagcaggacttggcagcctggagctaccctgtcaccctccaggtctat
catggcttgctgagcttctgcgttcataccaagcccaaggtgcggaaagcagcgcagcat
ggcgtgtgctctgtcctgaggggcagcgagttcatgtttggagacacggctcctgagcat
caccccgcagcaccctccaccgccaagttctgtgtgcaggagattgaaaaagctggaggc
accaaggaggcgaccaccaccctgcacgtcttggccctgctgcgggacctgctgccctgc
ttccctgcagccgtggtaaagacctgctgtgaaaccttgctccgagtcatgaccctcagc
cacgtgctggtgacagcgtgtgccatgcaagccttccacagcctcttcagcgcccaggcc
agcgtggcctgcctgccggccgagctcaacgcccaaatcatcaccgctctctatgactac
gtgcccagcacgagtgacctgcagccactgctgacctggctgtccaccatggagcaggca
cacgtcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccggctcttc
gctgctgccatgaactgcttcctctccccgcactcccaggtggtgtcagcggcagcgcag
accctggagaccctcctgagtgagtgtgttgctcctcacgtggatgacctgggcactgtc
tctgcgtctgccccagcccctgctgccttcctgtgcaagatgttcaaatcagtggaggag
ggcctgacataccgtttccttgcggcgtggggtgaggtgctgcgggtgctggaggtcttc
ttcgagacatgtgggaagcagtgtcaccccatcatgagaaagtgtctccggtccctgtgt
gacctacgtctgtccccacatttcccccacaccactgaagtggaccaggcggtgggggct
gctgtaagtgccatgggccctgaggtgctgctggaggctgtgcccctggagatcgatggc
aaggaggagacgctggatttcccccgcagctggctcctgccggtgctgcgggactacgtg
cagggtgcgcggctcggcttcttcaccagctacttcttgcccttggcggccaccctgaaa
agcagagccgtggagtttacccaggctgggaagagcatggaggccaagatctatgacaca
ctgcagtggcaggtctggactctgctgcccggcttctgcactcaccccacggacgtgctg
ggggccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgcccagacctg
cgccccactgtgtgccaggccttgcgcaccctcatccgcaaaggatgccagacagatgct
gagcgggcagaagtgggtcgctttgctaaaaatttcctgcccattctgttcaacgtgtac
agccaggctgaggaggatgcaggcagcaacgcgcagcgccgctctgtgctggacactgtc
cgtgcttacctgaccatcactgacgcccagatggtgtgcgggttcctgcagaaagccagt
gagaagctgaccagtcctgagagctccgagtttaccaggctctccatcctggacctggtg
gtggcaatggctccctatgccgatgagccatccctaggctccctgtaccgcaccatccaa
ccttccctccagagcaaggagcacagcatgcagaagaaggcgtatcgcgtgctggaggag
gtgtgtgctgctccacatggcccctgccaggcctttgtccgctcccacctgcgggatctg
cagacagcgctgctggactcgctcaagagcgcggcatccccggccaagaggccccggctg
aagtgcctgttccacattgtgaagcagctctctgcagagcacgagcccttcatcactgcc
ctggtcccggaggtcatcctgtgcaccaaggaggtgtcggtgggggcccgcaagaatgct
tttgtgctgctcgtggagatggggcatgccgtcatccgttttgggcccaccccccaagag
gccatggagaggttcctgctgctggtctacgcggggcttacgggctcggtcaccatgatc
agctgcacagtgctggcgctcacccgcctgttcttcgagttcaaagatcacctggagctg
agcgtggtggagcagcttctgcagaacgtctgcctgctgctggcctcccgcacacgggac
gtggtgaaggcagccctgggctttctcaaagtcgtgctgctgctgctggacaccaagctg
ctggccaagcatgtccaggccatgctggaggccttggggaacctttcggacgacatgaga
cgccatttccgcatgaagctgcgaaatctcttcaccaagttcatccgcaaattcggcttc
gagctggtgaaggggctgctgccggtcgagtaccacaaggtgctggtgaatatccgcaag
gctgaagcccggagccgcaagcagcgtgccctgaggcaggcagctgcagatacggatgaa
gagcaggcaccgccagcacagcccagaggagacagcatggaggagatcctggctgactca
gaggacgaggaggaggaagaggaggaatggcagcggagcagcaaggagcggaggaagcaa
gcacggcagaagggccaggcctggctgaaggagggggaagaggatgagcctctcaacttc
ctggaccccaatgtgtcccagcgggtgctggccaccaagccaggccccagccggtccaga
ggagtgagccatgacttccagatgtctgaggatgggcgcctgatcatccacgaagaggaa
gaggagattgacgatgctgaagccaaaggagtggacgaggagatggcagatgtgctgcaa
gatgtgggcctctgcagtaagaaaagccagaagcgtcggttcagagaggagcaggaagat
gaggaacctgaggctgggacctaccctcagtacagagctggaggctctgggatccatcgg
cagctggacaagcagccagcctttggtgcggagtacagatccaagaaaggcaaaggtgat
gtgaagaagaagggccagctcgacccctacgcctacatccccctgaacagagctaaactc
aacagaaggaagcgggcgaaaatgcagggccagttcaaggggctgatgaagggtgcccag
cgtggggctaaagccggccgcaggaaccgtctgaaggcccagcgcccctga
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