Caloenas nicobarica (Nicobar pigeon): 135990956
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Entry
135990956 CDS
T11056
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03020
RNA polymerase
cnic04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135990956 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135990956 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135990956 (POLR3A)
Enzymes [BR:
cnic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135990956 (POLR3A)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
135990956 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
135990956
NCBI-ProteinID:
XP_065495219
LinkDB
All DBs
Position
7:complement(25534220..25570129)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPMVSTFFQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQTLTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPRRPLIFDNNEFHIPLVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggacgtggccaagaaaataagccacatctgtttt
ggcatgaagtctccggaagagatgcgtcagcaagctcacatccaagtggtcagcaaaaac
ttgtacagtcaggacaaccaccacgctccgctgcagtatggagtactggaccatcgcatg
ggaaccagtgaaaaagaccgtccctgtgaaacctgtgggaaaaatctggctgattgttta
ggacattatggctacattgacttagaactgccctgttttcatgttggatacttcaaagct
gtaataggcatcctacagatgatatgcaaaacctgttgccgtatcatgctgtcagtggaa
gaaaaaaaacaatttttggattacctgaagcggcctggccttacatatcttcagaagaga
gggctaaaaaagaaagtgtctgaaaagtgccggaagaaaaacacttgtccttattgcggt
gcctttaatggaactgtgaagaagtgtggtttgttgaaaataatacatgaaaagtacaag
actaataagaaagtggtagatccgatggtatctacttttttccagtcctttgaaactgcc
atagaacataacaaagaagtagaacccttactaggaagagctcaggaaaacttaaatcct
ttagtagtattgaacctcttcaaaagaatcccagcagaagatatccctctgctcctgatg
aacccagaagcagggaaaccttcggatttgatcctcacgcgactcttagtgcctccgctg
tgtatcagaccctctgtggtgagtgacttgaagtctggcacaaacgaggatgacttaacg
atgaagctgacagagataattttcctcaatgatgtaataaaaaagcataggatatcggga
gccaaaacacagatgataatggaagactgggactttcttcaactgcagtgtgccctgtac
attaacagtgagctctcaggaattcctctcaacatggcacccaaaaaatggaccagaggt
tttgtccagagacttaagggaaagcaaggtcggtttagaggcaatctgtctggcaagcga
gtggatttctctggcagaacagtcatttcacctgatcctaacttaagaatagatgaagtg
gcagtgcctattcatgttgctaaaatactaacttttcctgaaaaggtgaacaaagcaaat
attaatttcatgaggaaacttgtccgtaatggccctgatgtgcatcccggagccaacttc
atacagcaaaggcacacacagatgaaacggtttttgaaatacggaaacagagaaaagatg
gcccaggagctgaagtttggtgatattgtggagcggcatcttatagacggtgacatagtt
ctcttcaatcgacagccctctcttcataagttgagcatcatggctcacattgctagagtg
aaacctcataggacattcagatttaatgaatgtgtgtgtacaccatacaatgcagacttc
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaagcagaagcactt
gttttaatggggactaaagcgaacttggtaacaccaagaaatggagaacctctcatcgct
gctattcaggatttcctcacaggtgcctatcttcttacattaaaagataccttttttgat
cgagccaaagcgtgtcaaattatagcttctatcctggttggcaaggatgaaaagattaaa
gttcgtcttccgcctccagcaattctgaagcctgtgacactctggacaggaaaacaagtt
ttcagcctcattctgaaacccagtgatgattgtcctgtaaaagccaatctacgaaccaag
ggcaaacagtattgtggcaaaggggaagacctgtgttacaatgattcttatgtcacaatt
caaaacagtgagttaatgagtggcagtatggacaaaggaactttaggttcgggatccaag
aacaacatcttctacatcttgctgagagactggggacaggtagaagctgcagatgccatg
tcacgactagccaggcttgctcctgtctatctttctaatcgtggattttcaattggaatt
ggtgatgtaacccctgggcagggactgctaaaagctaaatatgagctcctgaatgctggt
tataagaaatgcgatgagtatattgaagctctgaacactggcaagctgcagcagcagcct
ggttgtactgcagaagagacattagaggctttaatccttaaagagctctctgttatcaga
gatcatgctggcagtgcctgtctcagagaactggacaagagcaacagtccccttatcatg
gctctctgtggttctaaaggctcctttattaatatatcccagatgattgcttgtgtaggt
cagcaggctatcagtggttcccgagttcctgatggatttgagaacagatccttgcctcac
tttgagaaacattctaagctcccagcagcaaaaggctttgttgctaatagcttctattct
gggttgactcccactgaatttttttttcatacgatggctggtcgagaaggtctggttgac
acagctgtaaaaacagccgaaactggatatatgcagaggcggctggtaaaatcacttgaa
gatctttgctcgcagtacgatttgacagtcagaagttctactggtgatattatacagttt
atttatggaggagatggcttggatcctgcagccatggaagggaaagatgaaccactggaa
ttcaagcgagttctagacaatatcagagctgtgtatccatgccgaagtgaaccagccctt
agtaaaaatgaattggtgttaacatctgagtccatcatgaagaagaatgagtttctgtgc
tgccgagacagttttctgcagacattaactgagacaggttatgaaaaatataatgaggaa
attaaaaagttcatcaaaggtgtttctgagaagataaaaaaaactagggacaagtatggc
attaatgacaatggcacaacagagccacgagttttataccagttggataggattactcca
acacaactggagaagtttctagagacttgtagggacaaatacatgagggcgcagatggag
cctggttctgcagtaggagctctttgtgcacagagtattggtgagcctggcacacagatg
actctgaagaccttccattttgcaggcgttgcttcaatgaacattaccttgggtgtgcca
agaatcaaagaaatcattaatgcttcaaaggctattagcacccctattataacagcacaa
ctggataaagatgatgatcctgattttgcccgtttggttaaaggaagaattgagaagact
ttattaggagagatttcagaatatattgaggaagtgtttcttccagatgattgtttcatc
ctggtgaagctgtctttagagcgcattagactactgagattagaggtgaatgcagagact
gtgcgctactctatttgcatatctaaactcagagtgaagcctggggatgttgctgtccat
ggagaagcagttgtctgtgtgacccctcgtgaaaatagcaagagttcaatgtattatgtg
ttgcagtccctgaaggaagagctaccaaaggttgtagtgcaaggtataccagaggtttcc
cgggctgtcattcatattgatgaacaaagtggaaaggagaaatacaaacttctggttgaa
ggtgataatctgcgagctgttatggctactcacggagtgaaaggaacaaaaacatcctct
aacaacacttacgaggtagagaagacactaggaattgaagctgctcggacaaccattatc
aatgagattcagtatacaatggtgaaccatggtatgagcattgacaggagacatgttatg
ttactgtctgatctaatgacttacaagggcgaagtgctgggcattactaggtttggactg
gcaaaaatgaaggaaagtgtgttgatgctggcttcctttgaaaagactgccgaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtttctgagtgcatcatc
atgggaattccgatgaatattggaacaggactcttcaaactgttgcacaaagcagataaa
gaatcaacccctcctaggaggcctctgatatttgataataatgaatttcacattcccctt
gttacatag
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integrated database retrieval system
