Caloenas nicobarica (Nicobar pigeon): 135991058
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Entry
135991058 CDS
T11056
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135991058 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135991058 (U2AF1)
Spliceosome [BR:
cnic03041
]
Complex A
U2 snRNP components
U2 related factors
135991058 (U2AF1)
Complex B
135991058 (U2AF1)
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Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
135991058
NCBI-ProteinID:
XP_065495390
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Position
1:119488269..119505468
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AA seq
237 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctccatcttcggaacagagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgtcgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgtcgagatgcaggaacattatgatgaa
ttctttgaggaggtcttcacggaaatggaagaaaaatacggtgaagttgaggagatgaat
gtttgtgataaccttggagatcatctagttggaaatgtatatgtaaagtttcgccgtgaa
gaagatgcggaaaaggctgtgattgacctgaacaaccgctggtttaatggacagcccatt
catgctgagctctctcctgtgactgacttcagagaggcctgttgccgtcaatatgaaatg
ggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttctcgagag
ttaagacgcgagttgtatgggcggcggcgtaaaaagcatagatcgagatcaaggtcccgt
gaacgtcggtctagatccagagatcgtggtcgtggaggtggtggtggaggaggaggagga
cgtgaacgtgatagaaggcggtcaagagatcgtgaaagatctggtcgattctga
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