Caloenas nicobarica (Nicobar pigeon): 135991100
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Entry
135991100 CDS
T11056
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135991100 (TRUB1)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
135991100 (TRUB1)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
135991100 (TRUB1)
Prokaryotic type
135991100 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
135991100
NCBI-ProteinID:
XP_065495452
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All DBs
Position
7:complement(8698981..8734850)
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AA seq
286 aa
AA seq
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MAAREAGGAVLGRSAEKLFSLSGLFAVYKPKGPTSAGVLNLLKERLLAEAGVQTNENKRN
KVLKIGHGGTLDSAAAGVLVVGIGKGTKMLRAMLAGSKKYTAIGLLGKATDTLDATGKVT
EEKPYDQITKGDLENVLQKFIGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVR
VYNLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKQGPFTLEEHA
LHEDKWTIDEIARSLEHCTSLLPAEPSHKKLKAEHPGETAVSCEDK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagggaggcgggcggcgcggtgctcggcaggtccgccgagaagctgttctct
ctgagcgggctgttcgcggtgtacaagcccaagggccccacctcggccggcgtgctcaac
ctgctgaaggagaggctgctggcggaagctggtgtgcaaacaaatgagaacaaaagaaac
aaggttttgaaaattggacatggtggaactttggacagtgcagcagcaggagttctggtg
gttggtattggaaaaggaacaaaaatgctgagagcgatgttggcgggttccaagaagtac
actgccattggactgctgggcaaagctactgatacattagatgctacaggaaaagtaact
gaagaaaaaccttatgatcagataacaaaaggagatctggaaaatgtgctgcaaaagttc
ataggggacataatgcaggttcctccactctattctgctttgaagaaggatggagaaagg
ctgtcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggccagtacga
gtgtacaacctctctctccagcagttccagccaccactgttcacactggatgttgaatgt
ggtggtggcttttatgtcaggagcctggtcagtgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacaggggcctttcacgctagaggagcatgcc
cttcatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtct
cttctcccggcagagccatctcataaaaaattgaaggcagagcatcctggtgaaactgct
gtgagctgtgaagataagtga
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