Caloenas nicobarica (Nicobar pigeon): 135991188
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Entry
135991188 CDS
T11056
Symbol
PAAF1
Name
(RefSeq) proteasomal ATPase-associated factor 1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cnic03051
]
135991188 (PAAF1)
Proteasome [BR:
cnic03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
135991188 (PAAF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Nucleoporin_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
135991188
NCBI-ProteinID:
XP_065495583
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Position
1:214238442..214252994
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AA seq
392 aa
AA seq
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MAATLRIQSDWSQVLRRDEGEAWLSCRSPGKPTLYGSLTRRGLSTEGVPDIAASEGFVVG
EVTKKSIVVSCPRENVSTKFLAPYTTFCGIHQKSITCLDISSGGGLGVSTSTDGTMKIWQ
AANGEIRRLLEGHVYDVNCCRFFPSGLVVLSGGMDAQLKVWSAEDASCVVTFKGHKGGIL
DTAIVDRGRNVLSCSRDGTARLWDCGKSACLGVIADCGSPINGIAVGTADNSLNLGTPEK
PPSDREIGTERKILLLAREDKKLQGVGLQSRQPVFLFIGSDAFNCCTFLSSTYILAGTQD
GNIYQLDVRNTNTPIQVIHRSGAPVLSLLPYRDGFVASQGDGTCFVIQQDLDYVLDLTEA
DCDPVYKVASWEKQIYTCCRDGIVRRYQLSDL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgctgcggatccagagcgactggagccaggtgctgaggagggacgagggc
gaggcctggctgagctgccggagccctggaaaaccaaccctgtatggcagcctgacccgc
cgtgggctcagcaccgaaggtgtccctgacatcgctgcttccgagggcttcgtggttggg
gaggtcaccaagaaaagcatcgtcgtttcttgtcctcgtgaaaatgtgtccacaaagttc
ctggccccgtacacaactttttgtggaattcatcagaaaagcattacctgtcttgacatt
tccagtggcggagggcttggcgtctccaccagcacagacgggaccatgaaaatctggcag
gcggcgaacggagaaataagaagacttttggaaggccatgtgtatgatgtgaattgttgc
aggtttttcccgtcgggcctcgtggttctgagcgggggaatggatgcccagctcaaggtc
tggtcagcggaagacgccagctgcgtagtcacgtttaaaggtcacaaaggaggtattttg
gacactgccattgtggatcggggaagaaacgtcctttcctgctccagggacggcaccgcc
cgtctctgggactgcggaaaatccgcctgtctgggtgtcatcgccgactgcggctctccc
atcaacggcattgccgtgggtaccgccgacaactcgctgaacctgggcacgcctgaaaaa
cctcctagtgatcgtgagattgggacagaaaggaagatcctgctgctggctcgagaagac
aagaagctacaaggggtggggctgcagagcaggcagccggtgttcctcttcatcggatca
gacgccttcaactgctgcacgttcctctcaagcacctacatcctcgcagggactcaggac
gggaacatctatcagctggatgtgcgaaacacaaacaccccaatccaggtcatccacaga
tcgggagcaccggtgctttcgctgctcccgtaccgagacggatttgttgccagccaaggt
gatggaacctgctttgtcattcagcaagacctcgattacgtcctcgatctcacagaagca
gactgcgaccctgtgtacaaggtagcttcttgggagaagcaaatttacacgtgctgcaga
gatgggatagtgaggagataccaactgtccgacctttaa
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