Caloenas nicobarica (Nicobar pigeon): 135991270
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Entry
135991270 CDS
T11056
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135991270 (SMC4)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
135991270 (SMC4)
Condensin II
135991270 (SMC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
TPR_MLP1_2
DUF745
Motif
Other DBs
NCBI-GeneID:
135991270
NCBI-ProteinID:
XP_065495781
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Position
8:complement(27344671..27378613)
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AA seq
1306 aa
AA seq
DB search
MEGEQPTGIMPSKRTKTSTAAHRKGREPSEESSSDIEVENEGDRRPGKVPPQAVSDEVFD
NRSLEEILGSIPPPPPPAMANEAGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGP
NGSGKSNIIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCSVEVHFQKIIDKEGDD
YEVIPNSNFCVSRTAYRDNSSVYFINGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIQTLCRRIELLNEQRGEKLNRVKMVEKE
KDALEADKNTAIEFLCLENKMFKEKNCICQYYIHDLKKRINDVEMQKEKINEETKGVNEK
SSKLAEDMTTKNKALKELEKKLTKITKFIEENKEKFTQLDLQDIKVRENLKNAKSKAKKL
EKQLQKDKEKVEELKNVPSTSEKAISEATSKKELLEKTKEKEEEKLKQVMESLKEETQGL
QEEKQSKEHELMEFSKTVNEARSKMDVAQSELDIYLSRHNSAVAQLNQAKEALTTTSETL
KERKAAIKDIGIKLPQAERELKEKENALENLGREESSAKNLVRNLRQKVEEAKSSLALSH
SRGKVLQALLQQKKSGNIPGLYGRLGDLGAISEKYDVAISSCCGALDNIVVDTIDTAQKC
VNFLKAGGIGVATFIALDKMTVWEQKIQKIQTPENTPRLFDLVKVEDEKVLLAFYFALRD
TLVANDLEEATRVAFQNDQRWRVVTLKGQIIEQSGTMTGGGGKIMKGRMGSSVVMDISEE
EVNKMESQLQKDSKRVVQYEEQKSELEEAIRTLHQGVREMRNTLEKYTASIESLAEQEIN
LQTQIKELEANVIATAPDKNKQKELERVLNGYKKDYDCVAEKAGKIENEVKRLHNLIMEI
NNHKLKTQRDKLEKITKEIDECCSAVTKAQVAIKTASRNLKKSQDAVLRTEKEIESNEKE
IKDLTEELTMLENKAAEVIKDCRQAEETLPAVQEEQRSLLQEIKTLKDDEHALQKEALNI
KLKIEQLDSHISTHQSKIKYWQKEMSKLSLHSIEDKPPEELPVLSPEELEAIKDPDVITK
QIALLEAQCHEQKPNLGAIAEYKKKEELYLKRVAELDEITNERDKFRQAFEELRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGITFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNN
MFEIADRLIGIFKTHNTTKSVGTNPKVIAAKGLAELNGLGCLIAQK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaacagccaacagggatcatgccaagcaagaggaccaaaacctctacagca
gcccatcggaaaggcagagagccctccgaggagtcctccagtgacatagaagtggaaaat
gaaggtgacagacggcctggcaaagtacccccacaagcagtctcagatgaggtgtttgat
aatcggagtttagaagagattttgggtagcatccctcctcccccacctccagcaatggcc
aatgaagctggtgctcctcgtctcatgataactcatattgtaaaccagaacttcaaatcc
tatgcaggggagaaaactttgggaccttttcataagcgtttttcatgtattattgggcca
aatggcagtggaaaatccaatatcattgattcaatgctttttgtgttcgggtatcgagca
caaaaaatcagatccaaaaaactctcagtgctgatccataattctgacgaacatacggac
atccagagttgttctgtggaagttcacttccaaaagatcattgacaaggaaggagatgat
tacgaagtcattcctaacagcaatttttgtgtatctagaactgcctatagagataattct
tctgtctacttcatcaatggaaagaaaaagacattcaaagatgttggtattcttcttcga
agccatggaatcgatctggaccataacaggttcttaattttacagggggaagttgaacaa
atcgcaatgatgaaaccgaaggggcagacggaacacgacgaaggcatgctggagtacttg
gaagatttaataggatctgcacgactcaaagagcccatccagacactgtgccgcagaatt
gagcttttaaacgaacagaggggagaaaagttaaatagagtgaaaatggtggaaaaagaa
aaggatgccttggaagcggacaagaatacggccattgaatttctctgtttggaaaacaaa
atgtttaaagaaaagaattgtatctgtcaatactacatccatgacctcaagaagcgaata
aatgatgtggaaatgcagaaagaaaaaattaacgaagaaacaaaaggtgttaatgagaag
agcagtaaacttgcagaggacatgacaaccaagaataaagctttaaaagaacttgaaaag
aaactcactaaaatcacaaagttcatagaggaaaataaagaaaaatttactcagttggat
ttgcaggacattaaagtgagggaaaatctaaaaaatgccaaaagcaaagctaaaaaactg
gagaagcaacttcaaaaggacaaagaaaaggtggaagaattgaaaaatgtaccttccact
agtgaaaaagccatcagtgaagcaacatctaagaaagagcttctcgaaaagacaaaagag
aaagaagaagaaaaactcaagcaggttatggagagccttaaggaggaaacacaaggactt
caggaagaaaaacagagcaaagagcacgagcttatggagtttagtaaaacggtgaacgaa
gcgcgttcgaagatggacgtggcgcagtcagagctcgatatctacctcagccgtcacaac
tctgccgtggcgcagttaaaccaggcgaaggaggcgctgacgacgacctcagaaactctg
aaggaaaggaaagctgccatcaaagacatagggataaaattaccccaagctgaacgggaa
ttgaaggagaaagagaacgcacttgagaacctgggaagagaagaatcaagcgctaagaat
cttgttagaaatctgcgtcaaaaagtagaagaagccaaaagttcgttagcgctaagtcac
agtcggggaaaagtgcttcaggctctgcttcagcagaagaaatctggaaatattcctgga
ctctatgggagactgggagatttgggagccatcagcgagaagtacgatgttgctatttcg
tcctgttgcggggccttggacaacattgttgttgataccatcgataccgcgcagaaatgt
gtgaatttcttgaaggcgggaggaatcggagttgccacgtttatagccctggacaaaatg
actgtatgggaacaaaaaattcaaaaaatccaaactcctgaaaatactcctcggttgttt
gatctggtgaaagtagaagacgagaaggttctcctggcgttttactttgccttgcgggat
accctggtggccaacgacttggaagaagccaccagagtagcattccaaaacgatcagagg
tggagggtggtcacactgaaaggacaaatcattgaacagtcaggaacaatgactggtggt
gggggtaaaataatgaagggtagaatgggttcctcagtcgtaatggatatttcagaagaa
gaggtcaataaaatggaatctcagctgcagaaggattctaaaagagtagtgcagtatgaa
gaacagaaatcagaacttgaagaagccataagaaccctgcaccaaggtgttcgggagatg
agaaatactttagagaagtacacagcgagtattgagagtttagctgaacaagaaattaat
ctccaaacccaaattaaggaacttgaagcaaatgtaattgctactgctccggacaaaaac
aaacagaaggaattggaaagagtccttaatggttataaaaaagattatgactgcgttgcc
gagaaagctgggaaaatagaaaacgaagtgaaacgattgcataacctcataatggagatc
aataatcataaactgaaaacacagcgagacaaactggagaagatcaccaaggaaatagat
gaatgttgttcggctgtcactaaagcccaggtggcgatcaagacggcgagcagaaacctg
aaaaaatctcaagatgctgttctgcgcacggagaaggaaattgagagtaacgagaaagaa
attaaagacttaacagaagagctgactatgctagaaaacaaagccgccgaggttataaag
gactgcaggcaagctgaagaaacattgccggcagttcaggaggagcagcgcagtttactc
caggagattaaaactcttaaagatgatgaacacgcgcttcagaaggaagctcttaatatt
aagcttaaaatcgaacaacttgatagtcatatttctacacaccagtcaaagattaaatac
tggcaaaaagagatgtccaaattatcgctgcactccatagaagacaaaccacctgaagaa
cttccagtgctgagtccagaagagctcgaggccatcaaggatcccgacgttatcaccaaa
cagatcgcgctcctggaagcccagtgccatgaacagaaacccaaccttggggccattgca
gaatacaagaagaaggaagagctgtacttgaaacgtgtggctgaattggatgaaattacc
aatgagagagacaagttccgacaagcttttgaagaactgaggaaacaaaggctgaatgaa
ttcatggcaggatttaatgtcataacaaataaactgaaggaaaactaccagatgctaact
ttgggaggggatgcggaattggaacttgtggacagtctcgatcccttctcggagggaatc
acatttagcgttcggcctccgaagaaaagttggaagaagatatttaacttatcgggagga
gagaagactcttagttcgctggctctagtttttgctcttcaccattacaagccaacgcca
ctttattttatggatgagattgatgcagcacttgacttcaaaaatgtctctattgtggca
ttttacatatatgagcaaacaaaaaatgcacagtttatcatcatctccctgcgaaacaac
atgtttgagattgcggacagattaattgggatttttaagactcacaataccacgaaaagt
gtgggaacaaaccccaaagttattgcagctaaaggactggctgaactcaacggtctgggg
tgtcttattgctcaaaaatag
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