Caloenas nicobarica (Nicobar pigeon): 135991278
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Entry
135991278 CDS
T11056
Symbol
LGR5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135991278 (LGR5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnic04030
]
135991278 (LGR5)
G protein-coupled receptors [BR:
cnic04030
]
Rhodopsin family
Others
R-spondin
135991278 (LGR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
7tm_1
LRR_9
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
135991278
NCBI-ProteinID:
XP_065495809
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All DBs
Position
1:complement(57948374..58037604)
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AA seq
905 aa
AA seq
DB search
MATSHALLLLLLFCLPGLRRGARGGGQRPRGCPAPCRCEQDGMLVRADCSDLGLTAVPAN
LSVFTSYLDLSMNNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQN
NQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPVQAFR
SLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNY
NSLDEFPTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQH
LPELRTLTLNGASQITEFPDLTGTTSLESLTLTGAQITSLPKSACDQLPNLQVLDLSYNL
LEDLPCFTACKKLQKIDLHHNEISEIEADTFRQLAALRSLDLAWNKIKIIHPNAFSSLPS
LIKLDVSSNLLSSFPVMGLHGLTHLKLTGNHALQSLISSENFPELKVMEMPYAYQCCAFG
ACESHYKISSQWNKDENSSIDDFHRKDAGLLQIQDERDFEDFFLDFEEDLKAHHSVQCSP
SPGPFKPCDHLFGSWLIRIGVWTIVCLTFICNALVSATVFRPPLYMCSIKLLIGLIAVVN
ALMGLASGVLASVDASTFGSFAQYGAQWESGIGCQITGLLSIFASEASIFLLTLAALERA
FSVKHATKFETKSSIAGVKIAVFFCFMLALIIAVIPLLTGSEYGVSPLCLPLPFGEPTAM
GYMVALVLLNSLCFLVMTIAYTKLYCSLEKGELDNIWDCSMVKHIALLLFTNCILYCPVA
FLSFSSLLNLTFISPEVIKSILLVIVPLPACLNPLLYILFNPHFKEDLGSLRKQTLLWRR
SKHASLISVNSEDIEKQSCDSTQALVTFTSASISYDMPTSNSLMPSSYQMTESCNLSSVP
FVPCR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcccacgctctcctgcttctcctcctcttctgcctgccggggctgcggcga
ggggcgcggggcggcgggcagcgcccgcggggctgcccggcaccgtgccgctgcgagcag
gacggcatgctcgtccgcgccgactgctccgacctggggctcacggccgtgcccgccaac
ctcagcgtcttcacgtcctaccttgatctcagtatgaacaacattactaagctgccctca
aaccccgtgcacaatctccgcttcctggaagagctacgtcttgcaggaaatggcttgaca
tacattcccaagggagcatttgctggccttttcagtcttaaagtgctgatgctgcagaat
aaccaactacgccaggttcctactgaagcactccagaacttgcgcagcctgcagtctcta
cgtctggatgccaaccacatcaactatgtgccccccaactgcttcaatggtttggtctcc
cttagacacctgtggctagatgataattctctgactgaaattcctgtccaagcctttaga
agtttaccagcacttcaggcaatgacattggcactgaataaaattcattacataccagac
tatgcttttggaaacctctctagtttggtagttctacatctccataacaatagaatctac
tccctgggaaagaaatgctttgatgggctccacagcctagagactttagatttaaattac
aacagtctggacgagttccccactgctatcaggacactaacaaacctaaaagaactggga
tttcatagcaataacatcaagtcaatacctgaacgtgcatttgtgggtaatccatcactt
attacaatacatttttatgataatcctatccagcttgttggaaaatctgcttttcaacac
ttaccagaactcagaactctgactttaaatggtgcttcacagataacagagtttcctgat
ctgacagggactacaagtctggagagtttgacactcacaggagcacagatcacctctctc
cccaaatcggcttgtgaccagttgcctaatctccaagtgctggatctgtcttataactta
ctggaagatttaccctgttttactgcctgtaaaaagctccaaaaaattgacttgcaccac
aatgaaatcagtgaaatcgaagcagacacatttcggcagctggctgctcttcggtctctg
gatttagcttggaacaaaattaaaattattcaccccaatgccttctcctctttaccatct
ctgatcaaactggatgtgtcatccaaccttttgtcctcttttcctgtgatggggctacat
ggtttaactcatttaaaattaacaggaaatcatgccctgcaaagtttgatatcatctgaa
aattttccagaactcaaggtcatggaaatgccttatgcctatcagtgctgcgcctttgga
gcttgtgagagccactacaaaatctccagccaatggaacaaagatgagaatagcagcatt
gacgattttcacaggaaggatgctgggttgttacaaatccaagatgagcgtgactttgaa
gatttttttcttgactttgaagaagatttgaaagctcatcattcagtgcaatgctcacct
tctccaggtcccttcaaaccatgtgaccatctatttggtagctggctgatcagaattggt
gtgtggaccatagtgtgtctgaccttcatttgcaatgcactggtgtctgctacagttttc
agacctccattgtatatgtgctccataaaacttttgattggtttaatagctgttgtaaac
gccttgatgggtctggccagcggagtactggccagtgtggatgcatcaactttcggtagc
tttgctcagtatggagcacagtgggaaagtggaattggttgccaaataactggccttctc
tccatttttgcttcagaggcttccattttcctccttaccctagccgcgcttgaacgtgcg
ttctctgtaaagcacgctacaaagtttgaaacaaaatcctccattgctggtgtaaaaatt
gccgttttcttttgctttatgttggcactaatcattgcggtgataccgctcctcactggg
agcgagtatggggtttctcctctttgtttaccactaccatttggagaacccactgctatg
ggctacatggtagcactggtattgctgaactccctttgttttctggtaatgactatcgct
tatactaagctctactgtagtttagagaagggagaactagacaacatttgggattgctct
atggtcaaacatatagccttgctactatttactaattgcattctttattgccctgtggcc
ttcttatctttttcctccttactaaacctcacttttatcagcccagaagtcattaaatca
atactgctggtgattgtcccactgcccgcatgtctaaacccactcctttatatacttttc
aatccacacttcaaggaggacttgggaagtctgcgaaagcaaactttgttgtggaggaga
tcaaaacatgctagtctgatctctgtgaattcagaagacatagaaaaacaatcttgtgat
tcaacacaagcattggtaaccttcacaagtgccagcatatcatatgatatgcctaccagc
aattcactaatgccatcgtcttaccaaatgacagaaagctgcaatctgtcatcagttcca
tttgttccatgtcgctag
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