Caloenas nicobarica (Nicobar pigeon): 135991407
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Entry
135991407 CDS
T11056
Symbol
ABCF3
Name
(RefSeq) ATP-binding cassette sub-family F member 3 isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cnic03012
]
135991407 (ABCF3)
Translation factors [BR:
cnic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135991407 (ABCF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_15
AAA
NACHT
nSTAND_NTPase5
AAA_29
MMR_HSR1
RsgA_GTPase
NB-ARC
AAA_16
Dynamin_N
DUF87
AAA_23
ATP-synt_ab
PWI_CCDC43
TXNDC16_3rd
Motif
Other DBs
NCBI-GeneID:
135991407
NCBI-ProteinID:
XP_065496090
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All DBs
Position
8:complement(21074111..21085587)
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AA seq
712 aa
AA seq
DB search
MASCADILRSEFPDLDGEVFAYLTGILHGSGADFESVDELVEAVGELLREVSQDTKDDGA
IRDICQRLFSTLQLDEARAQRCSQVLLDAPIQLSQITDGYADASVDLLPGLLLKRGQTSM
VNAKKLEKAEARLKAKQDKRMERDSLKTSGPLVLEEASASQAASKKETRMESSGKNKSYD
VRIENFDVSFGERVLLAGADLNLAFGRRYGLVGRNGLGKTTLLKMIASRSLRIPSHISIL
HVEQEVAGDETPALQSVLECDTTRESLLREERDLTAKINAGRGEGTEGARLTEIYAKLEE
IEADKAPARASVILAGLGFNAKMQQQTTKEFSGGWRMRLALARALFARPDLLLLDEPTNM
LDVRAILWLETYLQTWQSTILVVSHDRNFLNAVATDIIHLHSQRLDTYRGDFENFMKIKE
ERLKNQQREYEAQQQYREHIQVFIDRFRYNANRASQVQSKLKLLEKLPELKPVDKESEVI
MKFPDGFEKFSPPVLQLDEVDFYYDPSHYIFRSLSVSADLESRICVVGENGAGKSTMLKI
LMGELAPVRGIRHAHRNLKIGYFSQHHVDQLDLNISAVELLARKFPGKTEEEYRHQLGSY
GVSGELAMRPVASLSGGQKSRVAFAQMTMSCPNFYILDEPTNHLDMETIEALAKALNKFR
GGVILVSHDERFIRLVCQELWVCENATVTRIEGGFDQYRDILKEQFRKEGFL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcgccgacatcctccgcagcgagttccccgacctggacggcgaggtgttc
gcttacttgacggggatcctgcacggcagcggcgccgacttcgagtcggtggacgagctg
gtggaggcggtgggggagctgctgcgggaggtgtcgcaggacaccaaggacgatggcgcc
atccgggacatctgccagcgcctcttcagcaccctccagctggacgaggcccgggcccag
cgctgcagccaggtgctgctggatgcccccatccagctctcccagatcaccgatggatac
gcagatgccagcgtggacctgttgccggggctgctgctgaagagaggccagacctcaatg
gtgaatgccaagaaactggagaaggcggaagccaggctgaaagccaagcaggacaagagg
atggagcgggattccctgaagacgtctggccctctcgtccttgaggaggcgtctgccagc
caagctgccagcaaaaaggagactcgcatggagtcatcaggcaagaacaagtcatatgat
gtgcgcattgagaacttcgacgtgtccttcggtgagcgcgtcctgctggcgggagcagac
ctgaatctggcgttcggacggcgctacgggctggtgggcaggaacgggctgggcaagacc
acgctgctgaagatgatcgccagccggagcctgcgcatcccgtcgcacatcagcatcctc
cacgtggagcaggaggtggcgggggacgagacgccggcgctgcagagtgtgctggagtgc
gacaccacgcgtgagagcctgctgcgggaggagagggacctgacagccaaaattaatgct
ggcaggggagaagggacagaaggtgccaggctaacggagatctacgcaaagctggaggag
attgaggcagacaaggctccagcaagggcatccgtcattctcgctggcctgggctttaat
gcaaagatgcagcaacagacaaccaaagagttttccggaggctggagaatgagactggcc
ttagccagagccctgtttgccaggccagatctccttctgctggacgagccaaccaacatg
ctggatgtgagggccattctgtggctggaaacgtacctgcagacctggcagtcgaccatc
ctcgtagtgtcccacgacaggaacttcctgaacgcggtggccacggacatcatccacctg
cactcgcagcggctggacacgtaccgcggggacttcgagaacttcatgaagatcaaggag
gagcggctgaagaaccagcagcgagagtacgaagcccagcagcagtaccgggagcacatc
caggttttcatcgaccgctttcgctacaacgccaaccgggcatcccaagtgcagagcaag
ctcaagctgttggagaagctgccagagctgaaacctgtggacaaggagtctgaggtgatc
atgaagttccccgatggcttcgagaagttctcccccccagtcctacagctagatgaagta
gacttctattacgacccaagtcactacatctttcgttccctctccgtctctgccgacctg
gaatctcgcatctgtgtggttggggaaaacggagctggcaagtcgaccatgctaaagatc
ttaatgggggagctggcaccagtcagagggatcagacatgctcacaggaacctgaagatc
ggttatttcagccagcaccacgtggatcaactggacctgaacatcagcgctgtagagttg
ctggcaagaaagttcccagggaagacggaggaggagtaccggcaccagctggggagctac
ggcgtctcaggggagctggccatgcgccctgtggccagcctgtctggaggacagaagagc
cgtgtggcctttgcacagatgactatgtcctgtccaaacttctacatcctggatgagccg
acgaaccacctggacatggagaccatagaggcactggcaaaggcactgaataagttccgg
gggggtgtaattctggtgtcccacgatgagcgcttcatccgcctggtgtgccaggagttg
tgggtgtgtgagaatgccaccgtgacccgcatcgagggtggcttcgaccagtacagagac
atcctgaaggagcagttccgcaaggagggtttcctataa
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