Caloenas nicobarica (Nicobar pigeon): 135991505
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Entry
135991505 CDS
T11056
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135991505 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135991505 (DHX36)
03012 Translation factors [BR:
cnic03012
]
135991505 (DHX36)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135991505 (DHX36)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135991505 (DHX36)
Translation factors [BR:
cnic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135991505 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
Sir1
PhoH
Motif
Other DBs
NCBI-GeneID:
135991505
NCBI-ProteinID:
XP_065496266
LinkDB
All DBs
Position
8:28684034..28703768
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AA seq
997 aa
AA seq
DB search
MRRVAAALGAGCRAAMSYEHRRDWGRGRGGDGGSSASSSAAGGHGGRGGGRGRHPSHLKG
REIGMWYARKQGQKSKETDRQQRAVVRMDERREEQIVQLLNTVQTKNEKEQEAMSWWSGD
EEGPAPEEPAKAKPDAEKAPVRQRPVLEKTFLDRDVEYLFEKNEQDTDLDEQLKEDLRKK
KSDPRYIEMQRFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIER
GKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCT
TGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLNA
EKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPE
KEEKEEMYRERWPEYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEEGAI
LVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIAT
NIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHC
YHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAI
NHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPF
VIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTL
QMLHNMKGQFAEHLLVAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFS
KKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLL
FFGGDISIQKDKDQDTIAVDEWIVFQSPARIANLVKNLRKELDDLLQEKIENPHPVDWND
TKSRDTAVLTAIIDLITTQENESARNYAPRFQSERYS
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggtggcggcggcgctgggagccggctgccgggcggccatgagctacgagcac
cgccgggactggggccgcggccgcggcggcgatggcggctcctccgcctcctcctcggcc
gcggggggacacgggggccgcggcggcggccgggggcgccaccccagccacctcaagggc
cgcgagatcgggatgtggtacgcgcggaagcagggccagaagagcaaggagacggaccgg
cagcagagagctgtcgtgcgcatggatgaacgcagggaagagcaaattgtgcagctgttg
aatactgtccaaaccaaaaatgaaaaagagcaagaagccatgtcctggtggtctggggat
gaagaaggacccgctccagaagagcctgcaaaagcgaaaccagatgccgaaaaagctcct
gtgagacagagaccagtcttagaaaaaacattccttgatcgggatgtggaatatctcttt
gaaaaaaatgagcaagatactgatttagacgagcaacttaaagaagacttaagaaagaag
aaatctgatccaagatacattgaaatgcagagattccgagagaagcttccttcatatggg
atgagacaggaacttgtaaaccttataaacaacaacagggtaactgtgataagtggtgaa
accggttgtggaaagacaacccaagtcacacagttcatcttggacgattacatcgagcga
gggaaggggtcgacgtgcaggatcgtttgtacgcagcccaggaggatcagcgctatctcc
gtggctgagagagttgctgcagaaagggcagaagcttgtggtaatggcaagagcacagga
taccaaattcggctgcagagtcggttaccgaggaaacaaggttccattttatactgtacc
acaggaattgtcctgcagtggctccagtcagataagcacttgtccagcattagtcatgta
gtccttgatgaaattcacgagaggaatcttcagtcagatgttctaatgagcattattaaa
gatcttttgaatattcgtttggatctgaaagtaatactaatgagtgctactttaaatgca
gagaagttttcggagtattttgataattgtcccatgattcacatacctgggttcacattc
cctgtggtagaatatcttcttgaagatgtaattgagaagttgaggtacaccccagagaac
acagatcgccgcccacggtggaagaaaggcttcatgcaaggacatgtaagcagaccagaa
aaagaagaaaaagaggaaatgtacagggagcggtggccagagtacttacggcagctacgg
ggcaggtattcagcaagtactatagatgccttggaaatgatggatgatgacaaggttgac
cttgatcttatagcagcacttatcagacacatcgttttggaagaagaggagggtgcaatt
ctagtgtttcttccaggctgggacaatattagcactctgcatgatctcttgatgtcacaa
gtcatgtttaagtcagataggtttattatcatacctttacattcattgatgcctactgtt
aaccagactcaggtttttaagaagaccccgccaggagtaaggaaaatcgtgattgctacc
aacattgcagagactagcattacgatagatgacgtcgtgtttgttatagacggtggaaaa
ataaaggaaactcactttgacacccagaacaacattagcacaatggcagcagagtgggtt
agtaaagctaatgccaagcagaggaaaggccgagcaggaagagttcaaccaggccactgt
taccatctctacaatggactgcgcgcgagccttctggacgactatcagttaccggagatc
ttgaggacgcctttggaagaactctgtttacaaatcaagattctaaagcttggcggaatt
gcttattttctgagcaaactaatggatcccccatctcgtgatgctgtaatgttggccatc
aatcatctaatggagctgaatgctttggacagacaagaagaactgactccactgggtgtc
catttagcgcgattgccagttgaaccgcacattggaaaaatgatcctgttcggagcttta
ttctgctgcttggacccagtgctgaccattgcagccagcctcagcttcaaggaccccttc
gtcattcctctgggcaaagagaaagtagcagatgcaagaagaaaggaactgtcaaagaat
actaaaagtgatcatctaactgtggtgaatgctttcacgggctgggaagagactcggcgt
cgtggtttccgaactgagaaagactattgctgggaatatttcctgtcttcaaataccctc
cagatgctgcataacatgaaaggacagtttgctgagcatctccttgtggctggatttgtg
aacagcagagaccccaaggatcccaaatctaataccaactcagataacgagaagttgctc
aaagcggtcatctgtgctggtttatatccaaaagttgcaaagatccgtccaagctttagc
aaaaagagaaaaatggtgaaagtttgcaccaagacagatggaacagttaatattcatcct
aaatcagttaatgtggaagaaacagagttccattataactggcttgtgtaccatttgaag
atgagaactagcagcatttacttgtatgactgtacagaggtgtctccatactgtctcttg
ttcttcggaggagatatatccattcagaaggataaagatcaggacaccattgctgtggat
gaatggattgttttccagtctccagcaagaatagccaacttagtcaagaatttaagaaaa
gagcttgatgatcttctgcaggaaaaaatagaaaacccacatcccgtggactggaatgat
actaaatccagggatacagcagtactgacagctattatagacttaatcacaacacaggag
aacgaaagtgccaggaactatgctccgcgattccagagcgaacgctatagttga
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