Caloenas nicobarica (Nicobar pigeon): 135991623
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Entry
135991623 CDS
T11056
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135991623 (ZC3H13)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135991623 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
135991623
NCBI-ProteinID:
XP_065496458
LinkDB
All DBs
Position
1:complement(184277261..184327452)
Genome browser
AA seq
1646 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
RREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKEKKAST
VPSPLLDQQRSSKSNQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKGKERSEEKAREVKE
RGRDFERHKEKKEKQRDPSESSHRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRAPA
KSTTHKRNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSSPQRKRSPSRHRSPGREKGRHDRDRTSQSHDRRHERRDETR
GKREKERETRDDRDYDQEQSTSRDHRDDRDTRDGRDRRETRDNRDRREPRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDTHKKDDQYQEDSRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDGHSSSGNYHDSWESRSS
YPDRDRYDSREQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERREERR
VDRSDDRRDERARERERERERDRERERERDREREREKERELERERARERERERERDKDRD
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERERGRDRDKERDRQR
DWDDKDKGREDRRDKREDIREERSSRDVHEERKSKKRHRNESSPSPRQSPKRRREHSPDS
DAYNSGDDKNDKHRLLSQVVRPQESRSLSPSHITEERQSRWKEEERKSDRKESSRRYEES
EFKERVSSADKQREQPDASESSRSRVQENLGHRPSEERDASDRMHDDSKKKSKVQKKATK
KKKDDDSGVERYTNESTTEESQVFSPKKGQKKKNIEKKRKRSKGDSEVSDEEIVPHHKKK
KGPRTPPVTKEELAEAPPEKAVAEVPQKREDTTFSDWSDEDVPERGDIVVPERSTEDSHR
KSHRTRGEKVEAPHVTIDDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQ
TGRKRILHSSSRDRDREREKKLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSS
PESDRQVHSRSGSFDSRERLQERDRHEHDRERERDRREGRQRDWDRDVDKDWPRSRDRER
LQEREREREKRRELDRERDRQPPDTAERERDRTLDISSQKESTKHSETKLDRDHEKEFDG
VCRDSAASEKERTDKDLGPLQGFEDGNEAEKVESLEGGEDEAKIDDVQSLGSGAGEYEPI
SDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAALLKFT
PGAVMLRVGISKRLAGPELFTKIKETCQRVLEKPKDAENLFEHDLGALNMAALLRKEERA
GLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRLSLRLFKRKTV
CQVPGQEKTEDNKIPQPTIQQEVCVS
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatctgatagcacg
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcaattatagaaggtcaccagaaaga
ccaactggagatcttcgggaaagaatgaagaataaacgtcaagatgttgaggcagagcca
cagaaacgaagtacagaggaatcatcctctcctgttaggaaagagtcttcacgagggaga
cgtagagaaaaggaggatatcaaaattacgaaggagagaacaccagaaagtgaagaggaa
aatggggattgggaaacaaatagagaggactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaacttatgaagttg
gaacaggaaaacatggagaaacgagaggaaatagtcattaaaaaagagatttctccagag
gtggttaggtctaaattatcaccatcgccatcaccaagaaagtctagcaaatctccaaaa
cgaagatccagtcccaaatcatcttcttcagctagtaagaaagagaagaaagcatctact
gtaccttccccacttttggatcagcagagaagttctaaaagtaaccagagtaaaaagaaa
ggtcctcgtacgcctagtcctcctcctccagtacaagaggagactcccctggggaaaaaa
cacaaagaaaaacataaaggaaaagaacgttcagaagaaaaggcaagggaggtgaaagag
agaggacgtgactttgaaaggcataaggagaaaaaagagaagcagagggatccctctgaa
agctcccatagacagaagcgttctcctagtcctgcagatcattctggcagtaattcttcc
ccttccagggagtattcaccacctgctgcaagacgaagacaaacctcccgagctccagcc
aagtcaaccactcacaaacgtaacttctcaccctctcgcaggtctgcttccccatcaggt
cagcatcattctcccatatcctccagacatcactcctcatcatcacagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaagaactccttctccgtcttatcaaagg
acagcttccccacctgcaaggcgatcctcttctccctatcctccacactcttcctcttct
cctcagaggaagcgaagcccttcgagacaccgatctcctggaagagaaaagggaagacac
gatcgtgataggacttcacagtctcatgatagacgccatgaaaggcgggatgaaactaga
gggaaaagggaaaaagaaagagaaacaagagatgatcgtgattatgaccaggaacagagc
acctccagggaccacagagatgacagagacactcgtgatggaagagaccggagggagaca
agagacaacagagaccggcgggagccaagggaatccagagacactcgagactccagagat
acaagagattatagcagagataccaaagatagtcgggatcagagagactcgcgctctaca
cgagattcccatgactacagagacagagagagtcgtgatacccataaaaaggatgaccag
tatcaggaggactcacgcagctatggaagatcccatggcagagaggagagctctcgtgct
gaaacaaggaatgactccagaagtgactccagaaatgagagcagaagcgatagaactggc
agaagtcgaggcagaggtccagaattatctgacaaaggaagtcgggggactagaggatcc
caggttgatggtcacagcagtagtggaaactaccatgacagctgggaatcaaggagtagc
taccctgatcgggatcgttatgatagtcgagaacaagcaagggattcctcctttgaaaga
agacatggtgaacgggacaggcgtgacaacagagaaagagatcagagagcaagctcacca
gtacgacatcaaggacgaagtgatgacctcgagcgggatgaaagaagagaagagcgaagg
gtagatcggtcggatgataggagagatgaaagggcccgggagagagagcgggaaagggag
agagaccgagagagggaaagagagagagaccgggaaagagaaagggagaaggaaagagag
ttggaacgagagcgtgctcgggaacgggagagggagagagagcgggacaaagacagggac
cgtgagcgtgaccgagacagggaccatgacagggaaagggaacgagaaagggagagagag
aaggaacgagagcgagagcgggaggaacgagaaagggagcgagagcgtgaaagagatcga
gagcgagaacgagaaagggagagaggtcgagacagggataaagaaagagaccgccagaga
gactgggatgacaaagataaaggaagggaagatcgcagagacaagagagaagatatcaga
gaagaaagaagttcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaat
gaaagcagtccaagtcctcgtcagtcacccaaacgtcgccgtgagcactctcctgatagc
gatgcttacaacagtggagatgataaaaatgacaagcatagacttctgagccaggttgtg
cggccacaggaatcccggtcactgagcccttctcacattacagaggagcgacagagtcgc
tggaaagaagaagagcgaaaatcagacagaaaggaaagttcacggcgttatgaagaatca
gagtttaaagagagggtttcttcagcagataagcaaagagagcaaccagatgcttcagaa
agctcacggtccagggttcaagaaaatcttggtcaccgcccttctgaagaaagagatgct
tctgatagaatgcatgatgacagcaagaagaagtctaaagtacagaaaaaggccacaaag
aagaagaaagatgatgacagtggggtggaaaggtacactaatgaatcaacaactgaggaa
agccaggtcttttcacccaagaagggtcaaaaaaagaaaaacatagagaaaaagcggaag
aggtccaaaggcgattctgaagtttctgatgaagaaattgttccacatcataaaaagaaa
aaaggcccaagaaccccccctgtaacaaaagaagaattggctgaagcaccacctgagaaa
gctgtagcagaagtcccccaaaaaagagaagatacaacatttagtgactggtcagatgaa
gatgttcctgaacgtggtgacattgttgttccagaaagaagcactgaggactcccacagg
aaaagtcataggacaaggggagaaaaggtggaagcccctcatgttactatagacgatgga
ccacaccgtaaaccagtggatcagaagcgcagcagcagcctcggtagcaatcggagccat
gcctcaagcagactgagatccccttccaatgagtcagctcatcgcagcggagatgaccag
actggacggaagaggatcctgcacagtagctctagagacagggacagggagagagagaag
aaattagaaatcacgggagaacggaagtccagaattgatcagttgaaacgaggggaaccc
agtcgcagcacatcttcagatcgtcaagattcaagaagccacagttcaagaagaagttct
cctgaatcagatcgtcaagtccattccagatctgggtcctttgatagcagggagaggctc
caggagcgagatcgacatgaacatgatcgagaacgagagagagacaggagagagggaagg
cagagagactgggatcgagatgttgacaaagactggccgaggagcagggatcgagagaga
ctccaggaacgagagagggaacgagagaaaagacgggaactggacagagaaagagacaga
caaccacctgataccgctgaaagagagagagacagaactcttgacatctcctctcaaaaa
gagtcaacaaaacacagtgaaacgaaactagacagagatcacgaaaaggaatttgatggt
gtttgtcgggactcggcggcttcagagaaggaaagaacagacaaagatttaggaccttta
caaggttttgaagatggaaatgaggccgaaaaagtagagagtttagaaggaggagaagat
gaagcaaagattgatgatgtgcagtcactggggtctggtgctggagaatacgagccaatc
agtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgggaggatcagcag
gaggatgagaagatgcctggtaaaaatcctgtggatgtcatagatgtagattggtccagt
cttatgccaaagcagccgaaagaaccacgggagcctggggccgcactcttaaaattcaca
ccaggtgctgttatgttgagagttggcatttccaagcgattggcaggaccagaactcttc
accaagattaaagagacttgccagagagtgttagaaaaacctaaagatgcagaaaacctt
tttgaacatgacctgggggctttgaacatggctgcacttctacgaaaagaagagagagca
ggtcttctcagtaacctgggtccttgctgtaaagcgctgtgctttcgaagggattctgca
attcgtaagcagctaatgaagaatgaaaagggtgcaacaaaacaaacctatacaaattct
gcagcaatggacagcgacttgttacgattgagtctacggttattcaaacgaaagactgtg
tgccaagttcctggtcaggaaaagacagaggataataaaattccacaaccaactatccag
caagaagtgtgtgtctcttga
DBGET
integrated database retrieval system
