Caloenas nicobarica (Nicobar pigeon): 135991752
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Entry
135991752 CDS
T11056
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135991752 (MSH4)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135991752 (MSH4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
nSTAND_NTPase5
ATPase_2
AAA_28
AAA_23
AAA_30
Motif
Other DBs
NCBI-GeneID:
135991752
NCBI-ProteinID:
XP_065496638
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All DBs
Position
8:29730780..29759587
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AA seq
921 aa
AA seq
DB search
MAGGGGAAAAAPNSGRGRPAPALSALGLLQTPRSTGGSTGGSCSGGAGPSSSSGGGRAAG
GAAGARPPVPGRGESYFGDKSSCVENTGTLNLTSSSSVRGLTSACVRKPPLSASRSVCRS
HTPLMGYSVTSSSATSAHAATSVIAAVVEGRGLARGEVGMASIDLKNPEMILSQFADNTT
YAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEY
IEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMID
SSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPPVDAETINMRLDCVQ
ELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEP
LKAALRSCNTSLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPN
INEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQMSVDCSALPNGQL
PSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKL
SDIVSMLDMLLSFAHTCTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGN
NFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNS
STFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATH
FLELCHIDALYPNVENYHFEVQHVRSNAGNKEKIAYTYTLSKGCTEEKNYGLKAAEVSSL
PSSVILDAKEITNHIAKQILHRQKSTPEMMKQRAVYQLAMRLVQTARNSRLDPDSLRMYL
KGLKKKYEASCPAPGQNDEQW
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggcggaggcgcggccgccgcggcgcccaactcgggccggggccgccccgcg
ccggcgctgagcgccctggggctgctgcagacgccgcgcagcacggggggcagcaccggc
ggctcctgcagcggcggggccgggccgagcagctccagcggaggaggccgcgctgcgggc
ggggctgccggggccaggccgccggttcccggcagaggagaatcatattttggggacaaa
agttcttgtgtagaaaataccggcacgctgaacctcacaagttcttcttctgtgcgaggc
ctgaccagcgcatgtgtcagaaaaccccccctctctgccagcaggtcggtgtgcaggagc
cacacccctctcatggggtactcagtgacatcctcatcagcgacctctgctcacgctgcc
acgtcggtgatcgcagcggtggtggaaggaagaggccttgccagaggtgaagtgggaatg
gccagtattgacctaaaaaatcctgagatgatattatcacaatttgcagataatacaact
tatgccaaggttattactaaactcaagatattaacaccattagaaataataatgtcaaac
actgcttgtgatgcaggaaacacaacaaaattgttcagtctgataacagaacatttcaag
aatgtgacttttacaactgtccaaagaaaatacttcaatgaaacaaaaggtttggaatac
atagaacaattgtgtgcgtctgaattcagcaccattttcatggaggttcaatcaaagtac
tactgtcttgcagctgctgcagctttgctaaaatatgttgaatttattcaaaattcagtt
tatgctcccaaatcactcaaggtgcgtttccaggggagtgagaaaacagctatgatagat
tcatcatcagcgcaaaatctcgaactagtaattaacaacagagattctcggaatggtcac
acactttttggtgtcctaaattacactaaaactccaggtggaagtcgaagacttagatcc
aatatcctggagccaccagttgatgccgaaacaattaacatgagactggactgtgttcag
gaattactccaggatgaggagctcttttttggtcttcaagcagttatctcgaaattcctg
gatacagaacaactactttccgttttggtacaaattccaaagcaggatacggttaaaacc
gctgaatcaaaaataactaatttaatctacctgaagcatactcttgaacttgtggaacct
ctaaaagctgcattaagaagctgtaacacatcgctgctaaaggcttattacaattctctt
gaagatacaaggtttggaataatacttgaaaagattacaactgtaattaatgatgataca
aggtacacaaaaggatgtctgagtatgaggacccagaaatgctatgctgtgaagcctaac
atcaatgaattccttgacatagctcgtagaacatacacagaaattgtcgatgacatagca
ggtatgataacacaacttgcagaaaagtacaacctaccaatgaaaacaagcttcagctct
gctcgtgggttttttatccagatgagtgttgattgttctgcattacccaacggccaactt
ccttcagaattcacaaagatcactaaaatgaaaaacacatacagcttcacttcagcagat
ttaataaaaatgaatgaaagatgtcaggagtccctgagagaaatctatcacatgacctac
ttaatagtgtgtaaactactgaacgagatctatgagcacattcattgcctgtacaagctg
tctgacattgtgtccatgctggatatgctgctctcgtttgcccacacctgcactctgtct
gattatgttcgtccagaatttacagatactttagcaatcaagcagggatggcatcccatt
cttgaaaagatagctatggaaaaacctgtgtctaacaacacatacctgacagagggtaat
aattttgtcattattacaggaccaaatatgagtggaaaatcaacatacctaaaacaaatt
gcactctgtcaaattatggcacagattggttcgtatgtcccagcagagtattgttctttt
cgaattgcagagcaaatttttaccagaataggtatggatgatgatatagaaacaaattct
tctacattcatgaaggaaatgaaagagataacatatatcatacaaaacgctaatgacaaa
tcacttatcatcattgacgaacttggcagaggtaccagtgctgaagaaggtattggcatt
tgctatgctgcctgtgaatatctgttgaatttaaaggcatttacattgtttgctacacat
tttttggaactgtgtcatatagatgctttatatcccaatgtggaaaattaccactttgaa
gtgcaacatgtcagaagcaatgctggaaataaagagaaaattgcttacacttacacactc
tctaaaggctgtacggaggaaaagaactacggattaaaagctgccgaagtttcctcccta
ccatcatctgtaattttggatgcaaaggaaatcacgaatcatatcgcaaaacaaattttg
cacaggcagaagagcactcccgagatgatgaaacagagagctgtgtaccagttagcgatg
agactggttcagaccgccaggaattctcgactggatccagacagtttgcgtatgtatttg
aaaggcttaaagaaaaagtacgaagccagttgtcctgcacctggacaaaatgatgagcaa
tggtaa
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