Caloenas nicobarica (Nicobar pigeon): 135991875
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Entry
135991875 CDS
T11056
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04217
Necroptosis
cnic04622
RIG-I-like receptor signaling pathway
cnic04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
135991875 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135991875 (CYLD)
04625 C-type lectin receptor signaling pathway
135991875 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnic01002
]
135991875 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135991875 (CYLD)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135991875 (CYLD)
Peptidases and inhibitors [BR:
cnic01002
]
Cysteine peptidases
Family C67
135991875 (CYLD)
Ubiquitin system [BR:
cnic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135991875 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
135991875
NCBI-ProteinID:
XP_065496769
LinkDB
All DBs
Position
9:4580436..4606781
Genome browser
AA seq
954 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLPIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDDKFPGVVRFRGPLLQERSLSGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPEAVSQDRRPPKLAYTSRGGADKSLFNHSKPKATGSTSEPGNRNRSEVFYTLNGSS
VDSQPQMKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFS
LTKASSTNGTMAHSPLSLSVQSVIGDVNPTANQESPSAPGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPK
DLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggcttatggagtcaagaaaaagcaagttcatcctattgggaagagcggatc
ttttacttgcttctccaagaatgcagtgtcatagacaagcagactcagaagctcttgaaa
gtccccaaaggtagcattgggcagttctttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaaggcaagaaactgccgatcggattaaagattctggaacaacctcac
gcgatcctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttttggccattactaactgtgaggaaagatacagtctgtttaaaagcaaaagcaggtta
actaaaggcatccaaatagatattggctcgcctgttcgagtacagctgagatcaggagat
gataaatttcctggagttgttcgcttcagaggacccttattgcaagaaaggtccctatcg
gggatatactttggagtagagttgctggaagaaggtcgcggtcagggctttacagatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggcgtggacatggataatcctattggaaactgggatggaaga
tacaatggaatccagctgtgcagttttgcaagtgttgaaagtacactccttttgcatatc
aatgatgttattccagaggctgtgtcacaggacaggagacctcccaagcttgcctacacc
tcgagaggcggcgctgacaaaagcctgttcaatcacagtaagccaaaggccacaggatct
acctctgaacctggaaacagaaacagatctgaagtcttctacacgttaaatggctcgtca
gttgactctcagcctcaaatgaaaacaaaacccccatggtatattgatgaagttgctgaa
gaccctgcaaaatcacttactgattcatctcctggatttgggcattcttcaccaccgctg
cagccacctttaacgaactctgtgtctacagaaaacagatttcactccctcccttttagc
ttgacgaaagcgtcaagtactaatggtactatggcacatagtcctctctctttatccgtt
cagtcagtcatcggtgatgtaaatcctacggctaaccaggagagcccttcagccccaggc
ccagtcgggaactcccatggtcttgaagcaggttccttggctgaagttaaagaaaatcct
cctttctatggagtgatccgctggattggccagccacctggagtaaatgaagtattagct
ggactggaactggaagatgaatgtgcgggttgtacggacggaacgtttaaaggaactcga
tacttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgcaggccagat
tccaggtttgcctcgttacagcccgtttccaaccagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtctagagacgatgattggaaagaagaaaggtatccaggggcactacaactcctgttac
ttagactccaccttattctgcctgttttcttttagctctgttttggacactgtgttactc
agacctaaagaaaagaatgatgtagagtattatagtgagactcaggagctgttgcggaca
gagattgtgaatcctctcagaatatatggatatgtatgtgctacaaaaataatgaaactg
aggaaaatacttgaaaaggttgaggctgcatcaggattcacttcagaggaaaaagatcca
gaagaatttttgaatattttatttcaccatattctaagagtcgagccactgttgaaaatc
agatcagcaggccagaaagtacaagactgttacttctatcaaatttttatggacaaaaat
gagaaggttggagtcccaacaattcagcagttactagagtggtcattcatcaacagcaac
ttgaagtttgcagaggcaccctcctgcctgattatccagatgcctcggttcggaaaagac
ttcaaaatgttcaacaaaatttttccatccttggaattaaatataacggacttacttgaa
gatacccccaggcagtgccggatctgtggaggactcgccatgtacgagtgcagagaatgt
tacgaagatactgatatttctgctgggaagatcaagcagttctgcaaaacgtgcaatacg
caagttcatcttcatcccaagagacagagccataaattcaatccgttgtcactcccgaag
gatctgccggactgggactggcggcacggctgcatcccgtaccagaagatggagttgttt
gccgttctctgcatagaaacgagccactatgtagcttttgtgaaatacgggagggatgac
tccgcctggcttttctttgacagcatggcagatcgggatggaggtcagaacggctttaac
attccacaagttaccccttgtccagaagttggtgaatacctgaagatgtctctagaagaa
ttacattcactggattccagaaagatccaaggctgtgcacgaagactgctgtgtgatgct
tacatgtgcatgtatcagagtccaacgatgagcttgtacaaatga
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