Caloenas nicobarica (Nicobar pigeon): 135991909
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Entry
135991909 CDS
T11056
Name
(RefSeq) B-cadherin-like
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135991909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135991909
Cell adhesion molecules [BR:
cnic04515
]
Cadherins
Major cadherins
135991909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
135991909
NCBI-ProteinID:
XP_065496830
LinkDB
All DBs
Position
9:23490762..23496750
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AA seq
849 aa
AA seq
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MRQPRSGLCPLFILLLLLPLLPAAAALAAPPARPCVPPGLRRGPLPAPASSGGCVGPYRS
EEPDVGVQEDGGPVRLLGVGRVLAGRHRDATGQPDPAPVPVRTRRSPQELPGARAAPRRR
KRDWVIPPIKVPENERGPFPKKLVQIKSNRDKDTKIFYSITGQGADAPPEGVFTIEKESG
WMKVTQPLDRERIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEIFRGSVP
EGALPGTSVMQVTATDADDAVETYNGVIAYSILSQEPREPHPHMFTVNRATGTLSVIASG
LDRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKTYEAAVPENAAGRE
VARLAVTDLDELNTPAWQAVYSILRGNEGGAFAIATNPASNEGVLRTAKGLDYEAKKQFV
LHVAVTNEAPFAVKLPTATATVTVNVEDINEAPVFEPPVQLARVPEDVPPGQTLTSCTAQ
DPDTAQGQRIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFAKNSTYAAVLLAVDDGS
PPATGTGTLLLTLLDVNDHGPEAEPRDITVCNHSPQPQVLTITDRDLPPNTSPFRAELSH
GSGESWAVEVGDKDDTVTLRLMAPLEPELYSVYLRLFDRPGKAQLTVITARVCDCEGPVQ
SCPQRPQPATGLPFVLAALGALLALLLILLLLLLFVRRRKVTKEPLLLPEDDTRDNIFYY
GEEGGGEEDQDYDLRQLHRGLDARPDVLLRNDVAPTLLPAPQYQPRPANPDDIGTFIEEN
LKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSDSDRDQDYDYLSDWGSRFKKLAE
LYGGGEEDD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagccgcgctccgggctctgcccgctcttcatcctcctcctcctcctgccgctc
ctgccggcggccgccgcgctcgccgctcccccggcccggccgtgcgtccccccggggctg
cgccgcgggccgctcccggcaccagcgagctccggaggctgcgtggggccgtacaggtcc
gaggagcccgatgttggggtgcaggaggacgggggacctgtgcggctgctgggcgtgggc
agggtgcttgctggccgccaccgggatgccaccggtcagccagaccctgcccctgtcccc
gtgcggaccaggcgctccccccaggagctccccggggctcgtgccgctcccaggaggcgg
aagagggactgggtgatcccccctatcaaggttcctgaaaatgagaggggccccttcccc
aaaaagctggttcagatcaaatccaaccgggacaaagacaccaagatcttctacagcatc
acggggcaaggggcagatgccccccctgagggcgtcttcaccatcgagaaggagtcgggc
tggatgaaggtgacgcagccactggacagggagcgcatcgacaagtaccatctcttctca
cacgctgtgtctgagaatggcaaaccggtggaggagccgatggagatcatagtgacagtg
acggaccagaatgacaacaagccccagttcacgcaggagatcttcaggggctccgtgccc
gagggcgctttgccaggcacctccgtgatgcaggtgaccgccacggacgcggacgacgcg
gtggagacctacaatggcgtcatcgcctactccatcctcagccaggagccacgggagccc
catccccacatgttcaccgtcaacagggccactggcaccctcagcgtcatcgccagcggc
ctcgaccgggagcgcgtgcgggagtacacgctgaccgtgcaggcggccgacctggacggc
gaggggctgaccacgacggcactggccgtgatcgagatcgcggatgtcaatgacaatgcc
cctgagtttgaccccaaaacgtacgaggcggccgtgccggagaatgcggccgggcgggag
gtggcccggctggctgtcactgacctggacgagctgaacacgccagcgtggcaagctgtg
tactccatcctgcgcggcaacgaggggggagccttcgccatcgccaccaaccccgccagc
aatgagggcgtcctccgcaccgccaagggtctggactacgaggccaagaagcagttcgtg
ctccacgtggccgtgaccaacgaggcccccttcgccgtgaagctgcccacggccactgcc
acggtgacggtcaatgtggaggacatcaacgaggcgcctgtatttgagccaccggtgcag
ctggcccgggtgccggaggacgtgccgccggggcagactctcacctcctgtactgcacag
gaccccgacacggcccaggggcagaggatcaagtacctggtggggcacgacccggcgggc
tggctggccgtgcaccctgagaacggcctcgtgacggcacgggaccacctggaccgcgag
tcgcccttcgccaagaacagcacctacgctgccgtgctgctggcggtggacgacggctca
ccgcccgccacaggcaccggcaccctcctcctcaccctgctcgacgtgaatgaccatggc
cctgaggccgagccccgggacatcaccgtttgcaaccatagcccccagccccaggtcctc
accatcaccgacagggacctgccccccaacaccagccccttccgcgctgagctcagccac
ggctcgggagagagctgggctgtggaggtcggtgacaaagatgacaccgtcaccctgcgg
ctgatggcaccgctggagccggagctctacagcgtctacctgcggctctttgaccggccg
ggcaaagcccagctcaccgtcatcactgcgcgggtctgcgactgtgaggggccggtgcag
agctgtccccagagaccccagcccgccaccggcctgcccttcgtccttgctgcccttggc
gccctcctggctttgctgctcatcctgctgctgctgttgctctttgtgaggaggaggaaa
gtgacgaaggagccgctgctgctgcccgaggatgacacacgggacaacatcttttactac
ggggaggagggcggcggggaggaggaccaggactacgacctgcggcagctgcaccggggc
ctggacgcccgccctgacgtgctgctccgcaacgacgtggcccccaccctcctgccggcc
cctcagtaccagccccgtcccgccaaccccgacgacatcggcaccttcatcgaggagaac
ctgaaagcggccgacacagaccccacggcccccccctacgactcgctgctggtgttcgac
tacgagggcagcggctcggaggccgcctcgctcagctccctcaattcctccgactctgac
cgcgaccaggactatgactacctcagcgactggggcagccgcttcaagaagctggcagag
ctctatggtgggggagaggaggacgattag
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