Caloenas nicobarica (Nicobar pigeon): 135991918
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Entry
135991918 CDS
T11056
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135991918 (KATNB1)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135991918 (KATNB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
RMC1_N
PROPPIN
Beta-prop_WDR19_1st
WDR54
Beta-prop_RIG_1st
VPS8_N
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_WDR11_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135991918
NCBI-ProteinID:
XP_065496839
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Position
9:complement(16311841..16329847)
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AA seq
658 aa
AA seq
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MAVAATTKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINMNEKLIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGGSFAQSTVSSFVV
DLNRVTKSGSVPHGLIRDDEPLVPPTPTGSSLRRIYDRPSTSCNKPQSRVKHNSESERRS
PSSEDDRDEKESRAEIQNQEDYKEIFQPKNVICRTPPRHSEPFPAPLEDEPVTAREAVKP
SPAVDVQTPLPNQEPPDPVQRPPIASSTPLTRTEPSVIPAARNEPIGLKASDFLPAVKNQ
SQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTSDIKNSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggccgccaccaccaagacggcgtggaaactgcaagagatcacggctcacagc
agcaatgtatcctcattagtcctgggaaaaagttcgggccggctgctggcaactggagga
gatgactgtcgggtcaacatatggtcagtgaacaagcccaactgcatcatgagcttgaca
ggccacacgacgcccatcgagagcctacagatcaatatgaatgagaaactcattgttgca
gggtcccagtcagggtccattcgagtttgggacctggaagctgccaaaattcttcgtacc
ttactgggtcacaaagcgaatatctgcagccttgatttccatccttttggaagctttgtg
gcatctggctctttggacacaaacattaagctctgggatgtgagaagaaaaggctgtgtc
ttcaggtacaagggtcacacagaagcagttcgatgtctccgctttagtcctgatgggaag
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctggctgctgggaag
ataatgtttgaatttacaggacataccggcccagtaaatgttgttgaattccatcccaat
gaataccttttggcttctggcagctctgacaggactgttcggttctgggacttggagaag
tttcaagttgtgagctgtattgaagaggaggctactcctgtcaggtgtgtgctcttcaac
ccagatggctgctgcttgtatagtggcttccaggattcgctgcgtgtgtacggctgggag
ccagagcgctgttttgatgtggtgctggtgaactggggaaaagttgctgacttatctatc
tgcaataaccagctgataggaggttcctttgcacaaagcacagtctcttccttcgttgtg
gatctcaacagagtcacaaagtcaggttctgttcctcatgggctgatcagggacgatgag
cctcttgtgccacctacccctacggggtcctcccttcgccgcatctatgacaggccctca
accagctgcaacaagccacaaagcagagtgaagcacaactcagagagcgagaggcgcagt
cccagcagtgaagatgaccgggatgagaaggaatcaagggctgagatccagaaccaggag
gattacaaagagatcttccagcccaagaatgtgatctgtcgaactcctcctcgacacagt
gagccctttccagcccctctggaggatgagcctgtaactgcgagggaagcagtgaagccc
agcccagctgtggatgtccagaccccattgccaaatcaagaacctcctgatccagttcag
aggccaccaatcgcctcctcaactcctttgaccagaacagagccgtcggtgattcctgca
gccaggaatgagcccattggcctgaaggcttctgactttctaccagctgtgaaaaaccaa
agccagactgagctcgtggatgaggaagccatgtcccagatcaggaaaggccacgagacc
atgtgtgtggtactcaccagccgccacaagaatctggacaccgtgcgggctgtctggagc
accagtgacatcaagaactctgtggactctgcagtggcgatcaacgatctgtctgttgtc
gtggacctcttgaatattgtcaaccaaaaagcgtctctctggaagctggatttgtgtact
atagtcctgccacagatagagaaactactccaaagcaaatatgaaagttacgtgcaaact
ggctgcacctccctgaaactcattctccagagattcctgccattgatcacagacatcctt
gctgcaccaccttctgtcggagtggacatcaccagagaggaaaggctccataaatgcaag
ctgtgctacaagcagctgaaaaacatcagcaacattgtcaagaacaagtctgggctcagc
ggccgccatggtagtgccttccgggaactgcatctcctcatggctgtcctggagtga
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