Caloenas nicobarica (Nicobar pigeon): 135991926
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Entry
135991926 CDS
T11056
Symbol
SNTB2
Name
(RefSeq) LOW QUALITY PROTEIN: beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135991926 (SNTB2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135991926
NCBI-ProteinID:
XP_065496860
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Position
9:23543582..23551657
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AA seq
523 aa
AA seq
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MRAGAWPLRPXPPPLQAPPLLPVRGGGSGMAVWTRACKTGLLELLLRERWVRVAAELSGE
ALSLTAEPGGGGGGGGGETAAVNGVVNGNAEAAPGCVRRVRVVKAEAGGLGISIKGGREN
RMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGKEVILEVKF
MREVTPYIKKPSLVSDLPWEGAPPQSPSLSSSEDSGSPQHQGPRDRKVIPLKMCFAARNL
SMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFTALHANIAALLPQVLAELNAMLGAG
GAAAGSREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDAVPWTRDAWASPCHSY
PLVATRLVHSGSGHRSPALGSELTFATRTGSRQGVEMHVFRVETHRDLSCWTRVLVQGCH
AAAELIKEVTVGCTLGGQGVQLCLHYEGGFTISREEPGGSAILFRYPYERLKMSADDGIR
TLYLDFGGPEGELALDLHSCPKPIVFVLHTFLSAKVTRMGLLA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggggcgtggcccctacggccancgccccctccgctccaggccccgcccctt
ctcccggttcgcggcggcggcagcggcatggccgtgtggacgcgggcgtgcaaaacgggg
ctgttagagctgctgctccgggagcgctgggtgcgggtggcggcggagttgagcggcgaa
gcgctgagcctgacggcggaaccggggggaggaggaggaggaggcggtggcgaaacggcg
gcggtgaacggcgtggtgaacggcaacgcggaggcggcgcccggttgcgtgcggagggtg
cgggtggtgaaggcggaggcgggagggctcggtatcagcatcaagggaggtcgggagaac
cgtatgccggtgctcatctcgcgtatcttcccggggctggcggcggaacggagcggagcg
ctccggttgggcgacgccatcctcgccgttaacggcgtcgatctccgggatgccacccac
gatcaagccgtccaggcgctgaagcgagccgggaaggaggtcatcctcgaagtgaagttc
atgcgggaggtgaccccctacatcaagaagccctcgctggtgtcggacctgccgtgggag
ggggcccccccgcagtcacccagcctgagcagcagcgaggactcgggctccccccagcac
cagggcccccgtgaccgcaaggtgatcccgcttaagatgtgtttcgctgccaggaacctc
agcatgcctgacctggagaacaggctgatcgagctgcactcgccggacagcaggaacacg
ctgatcctgcgctgcaaggacacggccacggcccactcctggttcaccgcgctgcacgcc
aacatcgccgcgctgctgccccaggtcctggccgagctcaacgccatgctgggcgccggc
ggggccgcagctggcagccgggaggtgaagcacattgcctggctggccgagcaggcgcgt
ctggacggcgggcggcagcagtggcggccggtgctgatggcggtgacagagaaggacctg
ctgctgtacgatgccgtgccctggacccgggacgcctgggcctccccctgccacagctac
ccgctggtggcaaccaggctggtccactcaggctccggccaccgctcgcccgccctgggc
tcggagttgaccttcgccacgcggacgggctctcgccagggtgtggagatgcacgtcttc
cgtgtggagacccaccgggacctctcctgctggacacgcgtcctcgtccagggctgccac
gccgccgctgagctcatcaaggaggtgacagtgggctgcacgctgggggggcagggggtg
cagctctgcctccactacgagggcggcttcaccatcagccgggaggagccaggcggcagc
gccatcctcttccgctacccctatgagaggctgaagatgtcggcggacgacggcatcagg
accctctacctggacttcgggggccccgagggggagctggcgctggacctgcactcctgc
cccaagcccatcgtctttgtcctgcacaccttcctctcggccaaagtcactcgcatgggg
ctgctggcgtag
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