Caloenas nicobarica (Nicobar pigeon): 135991931
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Entry
135991931 CDS
T11056
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135991931 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135991931 (VPS35)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
135991931 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
135991931
NCBI-ProteinID:
XP_065496867
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Position
9:complement(2678317..2704620)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYLYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcaatctcctcaggatgaacaggaaaagctcctggatgaagccatt
caggctgtgaaggtgcagtctttccagatgaagagatgcttggacaaaaacaagctcatg
gatgctctgaaacatgcttccaacatgcttggtgagctgcggacttctatgttatctcca
aagagctattacgagctctacatggcgatttctgatgagctacactacttggaagtctac
ctgacagatgaatttgccaaaggaaggaaagtggcagacctttatgagctagtacagtat
gctggaaatattattccaagactgtatctcctgataacagtaggtgttgtctatgttaag
tcatttccacagtccaggaaagatattttgaaggacctggtggagatgtgccgtggagta
cagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaatatc
ttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagcgattcgatg
gattttgtgctgctgaactttgccgagatgaacaaactttgggtgcgaatgcaacaccag
ggccacagtcgggacagagagaaaagggagcgagaaaggcaggagctgagaattctcgta
ggaacaaacctagttcgcctcagtcagttggaaggtgttaatgtggagcgatacaagcag
attgttttgcctggaatactggagcaagttgtaaactgcagagatgctttagctcaggag
tacctcatggagtgcatcatccaggttttcccagatgaatttcacctccaaaccttgaac
ccatttctcagagcctgtgctgaactacaccaaaatgtgaatgtgaaaaatataattatt
gctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatcccagca
gatatcaaactgtttgacatcttttcacagcaggttgctactgtcatacagtctcgccag
gacatgccttcagaggatgtggtatctttgcaagtttctctcattaacttggctatgaaa
tgctacccggaccgtgttgattatgttgataaggtgttggagacaactgtggaaatattc
aacaaacttaatctggaacatattgcaacaagcagtgctgtttcgaaggaactgactaga
cttttgaaaatccctgttgatacttacaacaatatcctgacagttctgaaactaaaacat
ttccacccactctttgaatacttcgattacgagtccaggaagagcatgagttgttacgtg
cttagcaatgtgttggattataacacagaaattgtttcccaggaacaggttgatgcgatc
atgaatttggtatctacgctgatccaggatcaaccggatcagcctgctgaagatcctgac
cctgaggactttgctgatgagcagagtcttgtgggaagatttattcatctcctgcgttca
gatgaccccgaccaacagtatctgatcctaaacactgcccggaaacattttggtgcaggt
gggaaccagcgtattcgttttacgctgccacccttggtttttgctgcataccagcttgct
tttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgtcagaagatc
ttctcgtttgctcatcagaccatcagtgctctgatcaaagccgaactggcagagctgcct
ctccgtcttttcctacaaggagcactggctgcaggagagatcggctttgagaatcacgaa
actgtggcctatgaattcatgtcccaggccttctctctgtacgaagatgaaatcagtgat
tcgaaagcgcagctggctgcaatcaccttgataattgggacgtttgagaggatgaagtgc
ttcagtgaggagaaccacgagcctttgaggactcagtgtgcgctggcagcctccaagctc
ctgaagaagcccgaccagtgccgggctgtgagcacttgtgcccatctgttttggtctggc
cgaaatacggacaagaatggagaggagcttcacggaggaaaaagagtgatggaatgcctc
aagaaggctctgaagatagcaaatcagtgcatggacccttctctgcaagtccagcttttc
atagaaattctgaataggtacctctatttttatgaaaaggaaaatgaggcggtgacaatt
caggttttgaatcagcttatacagaagataagagaagatctcccaaaccttgagtctact
gaagaaacggaacaaattaacaaacactttcacaacacactggagcacttgcgcctgagg
agggaatcaccagaatctgaggggccaatttacgaaggtcttgttctttag
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