Caloenas nicobarica (Nicobar pigeon): 135991949
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Entry
135991949 CDS
T11056
Symbol
PHAF1
Name
(RefSeq) phagosome assembly factor 1 isoform X1
KO
K27411
phagosome assembly factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135991949 (PHAF1)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Other autophagy associated proteins
Others
135991949 (PHAF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
135991949
NCBI-ProteinID:
XP_065496895
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All DBs
Position
9:18717876..18749882
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AA seq
423 aa
AA seq
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MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNL
TQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NSAEQLFHLNFRGLSFSFQLDSWTETPKYEPNFAHGLASLQIPHGATVKRMYIYNGNSLQ
DTKAPLMPLSCFLGNVYAENVDVLRDGTGPSGLRLRLLTAGCGPGVLADAKMRVFERCVY
FGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDAN
THKVKKFVLHTNYPGHYNFNIYHRCEFKIPLVIKRDSADSQTETCTTYSKWDSIQDLLGH
PVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPTRPSSQMRTSD
LPQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaggtggtgcccgagcgctctctggggaacgagcaatgggagttcacc
ttgggaatgccgttggctcaggctgtagcaattcttcagaaacactgtcgcattatcaaa
aacgtccaggttctctacagtgagcagtcacctcttagccatgacctcatccttaacctg
actcaggatggaatcaaactgctgtttgatgctttcaatcagagacttaaggtgattgaa
gtttatgacttgactaaggtgaaattaaaatattgtggtgtccattttaactctcaggca
attgctccaactatagaacaaattgatcagtcatttggagcaacacatccaggagtgtat
aattcagctgagcaactctttcacctcaatttcagaggactgtcgttttcttttcagtta
gactcctggactgaaacgccgaagtacgagcctaactttgcccacggtttagcctctctg
caaattccacatggtgcgactgtgaaacgtatgtacatctacaacggaaacagtctgcag
gataccaaggctcccttgatgcccctcagctgtttccttggtaatgtgtatgctgagaac
gttgatgttctgcgagatggaactggaccctcaggtttacggcttcgcctactcactgca
ggttgtggcccgggtgttttagccgacgccaagatgcgggtatttgagcgttgtgtgtac
ttcggtgattcgtgccaggatgtgctgagcaccctggggtctccgcacaaagtcttctac
aagtctgaagataagatgaaaatccactcgccctcgccccataagcaggtcccgtcaaag
tgcaatgactacttcttcaattatttcactcttggagtggatatcctctttgatgcaaac
actcacaaggtgaagaaatttgtcctacatacaaattatcctggtcattacaactttaac
atttaccatcgctgtgaattcaagattccactagtcattaagcgagatagtgctgattca
cagaccgaaacatgtacaacgtacagcaagtgggacagtattcaggatcttctggggcac
cctgtagaaaagccagtggtacttcacaggtcatcatctccgaacaacactaacccattt
gggtcaaccttttgctttggattgcaacgaatgatctttgaggtgatgcagaataatcac
atagcttctgttactctctatggcccaacgcggcccagcagccagatgagaacatcggac
cttccccagtga
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