Caloenas nicobarica (Nicobar pigeon): 135991950
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Entry
135991950 CDS
T11056
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135991950
04091 Lectins [BR:
cnic04091
]
135991950
Ion channels [BR:
cnic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135991950
Lectins [BR:
cnic04091
]
C-Type lectins
Others
135991950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Lectin_C
Ion_trans
GPS
PKD
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
135991950
NCBI-ProteinID:
XP_065496897
LinkDB
All DBs
Position
9:complement(19439238..19478314)
Genome browser
AA seq
2483 aa
AA seq
DB search
MWLGIAVLISLAVCSAVEVAAADEGSPCSKYQLAFNHSCYEFVRLQRSFTSAQSWCERGG
GHLVFIENEETQQFLQKHIAEDQEWWIGLISNSLLNETTDGAMIWLDTSNISYSNWYKDH
PSPFSSTCGYILKNAKYQWGVTENCSQEFDFICEFESSQSIACDNYNATVQCGSGEVIQI
GESFYGRKTPHYCVSETPLRYDPDGDCSWVSVQDEVAGQCHGLQACQVTADRTFFGDPCP
AYGSYLAVQYHCREGLQLLVTDTCFVFENITVGLNWLLSPYSGNLSCIISTGDGHTIDPY
YPLTLVSNVTYRYSSPGEFTVFVECTTSEWHVTAQKRVTVQDKMDQLSITRCYSQYESGN
SSHCRTLYGELLWIQVELNGGNGVTYVMLADNMTLTESSAKEGIVPHNLTLDSASQQLLG
PGTHQLEIRASSNTTASEISESIAVHLVEPVSGLQAALASHTLQLGENLEINVSVSHGAP
DKLKFEVIGPNETQSHKEDGPHGEPRTYTVPVCSEGSFLVKVVAMNAFSNVSLDLGSITV
LANSSHQEDSAKEERSSKTNARKTNGHRRKNKIHIKPSRHVDPFTTVTLGWPDKSSNFSF
LWSCGACWPEWNECVQQQIILTNQTEVQIPPSCLPPPKSAVTVRVLVRNDGNEERQDEQC
LYVTARQELQLEIRCEANCRPVNASEEVVLRVSGQKDSQAIYYNWYLDNAFQSKPMTLPP
ACGLIGFRQNSLNLLQSNTSVLKMNSSFLQTQGEAFQIKVTAMTQGGYGEETFLVSTMPP
PESPACAVSPKQGSVLTAFTVSCSAPCSANSCQSSRDRQLTYCFYLKPSSLLHCGPDPEL
FPVYLPLGEEENNFILHMTITVSNDFGDTVQTNASVKVGHAAMTDGNLTLQAIVSEKANS
ILKDRNNSMSLFQLYQSVTSVLNQEAQEESLNMSLQTDTRKELRGLMLTTLSAVNITSMQ
TALKMSEVLKEITYRSEELSVSAQVEASNTLKDVSASLLTVNTEDSRDDQKLKDAANYLF
NAVSNVLKASAEIGAANTSVLEAEQSSVSHQLLNTVENLQSALLFGKEPDDEPTVLSAPS
ATMYIHRLQAENMDGTSINISNSSSASFTLPPASSLSVSGVDGETVDIRMVSFAVNPFFS
SETSFDISGTVGGLSLTGLDGLIIPVSNLKENIEIMLPRLSAAQEDRILLNLGNFSTFQV
NVTSENTSIVIHLECEHDIPLILYLGYGYRPNETNYDMKNHLFYKKTAGGETNTWVLGPE
ELVFGEGTYYFMVLQDMGMDSTVYDRLTVAVTCFASRCVFWDEHQGNWNSYGCHVGPKTN
PRSTQCLCNHLTFFGSSVFVIPNTVDVTKTVELFGTFVDNPVVVTTVGCIFLIYVLVVIW
ARRKDIQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRRAATTSKVTLTLYGLEGESEPH
HLTDPESPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAGDQK
WYFLCNSWLAIDIGECVLDKVFPVATEQDMKQFSNLFFIKTSKGFQDGHIWYSVFSRSPR
SSFTRAQRVSCCFSLLLCTMLTSLMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLM
FPINLLIVQIFRNVRSQPAMQGREKKPGKSGRVSPSLPPTPQVTQAVSLTPEAVTKDIRR
IANSLFKALKTPSLTSVSDLGKSTNINTLLALVEDIICQQNRAGQGFYDDSKKKDDPIIV
TLGAVDIQEKTRSPIPEKGTCERLKHSDYNRCLYMQLQHVEMELELLGPNKFQMPQSYTQ
AVRQVQHMKNLLENQICSSASVSEGWSLTPSFSGDGKKSSSSKGLPWWFVFIAWFLVAAT
SGVSGFFTMLYGLHYGKENSIKWLISMAISFLESLFITQPLKVLGFAAFFALVLKKVEHE
DEENTAIDGPLSAPGDSNPLFGARRDSRSNIYRPPPAADVEKMKISCLKEQKAFALIREI
LAYLGFLWMLLLVAYGQRDPNSYYLNKHIENSFTDGFHDVYSYQDFFTWANTTLVKNLYG
SYKGFITDGNSKLVGSARIRQVRVKGDTCPISPKLQRVMQECHAPYSLQTEDTADYGEHW
NSSVSDNSSDLSSAWQYQSQSQLRGQPSWGKLAIYGGGGYVIHLGTDPKNASRILQYLFN
NVWLDSFTRAVFVEFTVYNANVNLFCLISLMFETNALGAFFTSAELQSIRLYPYTNSLHI
FVIAAEVIYFLFIVYYMIVQGKQMKTLRWRYFHSKWNLLEMAIILISWSALSVFVKRTIL
GTRDISYYQEHKEDCVSFNETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTL
RRAWGDISGFITVIAIMFLAYSIATNLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVL
DYNPILGSFLIGSCIILMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLTKIFSF
LGIKCKKEEKPVTNDQLKQPVSN
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgggattgcagttctaatttctcttgctgtatgttcagctgtggaggtggca
gctgctgacgaaggaagcccttgctcaaagtaccagctggctttcaaccattcatgctat
gagttcgttagactccagcgtagcttcacaagtgcccagagctggtgtgagagaggcgga
gggcaccttgtctttattgaaaatgaggaaactcagcagttcttgcaaaaacatattgct
gaggatcaggaatggtggataggactgatctcaaactccttgctgaatgaaactactgac
ggggcaatgatttggctggacacttccaatataagctacagtaactggtacaaggatcac
ccatctcctttctcatccacatgcgggtacatcctgaagaatgccaagtatcagtggggc
gtgaccgaaaattgcagccaggaatttgacttcatttgcgagtttgaatctagccaaagc
attgcttgtgataattacaatgccactgtacagtgtggatcaggagaagttattcaaatt
ggagagagcttctatggacggaagaccccccattactgtgtatcggagactcctctccgg
tacgatcccgatggagactgcagctgggtcagcgtccaggatgaagtagcaggccagtgt
catggtctccaggcctgccaggtgacagcggaccgcactttctttggagacccttgtcca
gcttatggcagctatttggctgttcaataccactgcagggaaggtctgcagctgcttgta
acagacacatgctttgtctttgaaaatatcacggtcggtttgaactggctgctctctcca
tactccggcaacctttcctgtatcattagcactggagacggccacactattgatccctac
taccctctaacactggtcagcaatgtcacatatagatattcatctcctggagagttcact
gtttttgtggaatgcacaaccagtgaatggcacgtgacggcacagaagcgggtgactgtt
caagataagatggatcaactgagcattaccaggtgctacagccagtacgaatctgggaac
agctctcactgccgtacactgtatggggagctgttgtggattcaagttgaactcaatgga
ggcaacggagtgacctacgttatgctagcagacaatatgactctcactgaatccagtgcc
aaggaaggaattgtccctcacaatctgacgcttgacagtgcctctcaacagctgctaggc
ccagggacacatcaactggaaatccgggcatccagcaacacgaccgcatcggagatctct
gaaagtattgctgttcacttagttgagccggtatctggtcttcaggctgcattagcttct
cacactctgcagctgggggagaatttggagataaatgtctctgtgtctcacggtgcccca
gataaactgaagtttgaggtgattggacctaacgaaactcagtctcacaaagaagacggt
cctcacggggaacctcgaacgtacaccgttcctgtgtgctctgaaggttctttcctagtg
aaagtggtggccatgaatgccttttctaacgtgagtctggatcttgggtccatcactgtg
ttggcgaacagttctcaccaagaagattctgctaaggaagaacgcagctccaaaacaaat
gcccgaaagacaaatggtcacagaagaaaaaacaaaatacatattaaaccgagtcgccat
gtggatcctttcacaactgttacacttggctggccagacaaaagcagcaattttagtttt
ctctggtcctgtggagcttgctggcctgagtggaacgagtgtgtgcagcaacagataatc
ctaaccaaccaaactgaggtgcaaatcccaccttcctgccttcctcctccaaagtcagca
gtgaccgtcagggttctggtccgaaatgatggcaatgaagagaggcaggacgagcaatgt
ctttacgtgactgcaagacaagaactgcaactggaaatcaggtgtgaggcaaactgcagg
ccagtgaatgccagtgaagaggtggttttgcgtgtctctggacagaaggactctcaggcc
atatattataactggtatttagataacgcattccaaagcaagcctatgaccctccctcca
gcctgtggcctgattggtttccggcagaactctttgaatttgcttcaaagcaacacatct
gtgttgaaaatgaacagctccttcttgcagacacagggagaagcttttcagattaaagta
acagcaatgactcagggcggctacggggaggagacgttcctcgtcagcaccatgcctccg
cccgagagccccgcttgtgccgtgtctcccaagcagggatcagtgctcaccgcgttcaca
gtttcctgcagcgctccttgctcggcaaattcatgccaatccagtcgtgacaggcagctc
acgtactgcttctatctgaaaccaagttctctcctgcactgtggcccggatcctgaactc
ttcccagtttatcttccacttggagaagaggaaaataatttcattttacatatgacaatt
actgttagcaacgacttcggtgatacagttcaaactaatgcttcagtgaaggttggacat
gcagctatgactgacgggaacctgaccctgcaggctattgtatccgagaaggcaaactcc
atcctcaaagacaggaacaacagcatgagtctcttccagctgtaccagtcggtgacttca
gtcctgaaccaggaggctcaagaggaaagcttgaacatgtctttacagacggacacacga
aaagagctccgagggctgatgctgacgactctctctgctgttaacatcacatcaatgcag
actgctctgaagatgtcagaagtattgaaagaaatcacttacaggagtgaagagctgtct
gtctcagcacaggtggaagctagcaacactctaaaagatgtcagtgcttcgttgctcact
gtaaacacggaggacagcagagatgatcagaagttaaaagatgcagccaactatctattt
aatgcagtgagcaatgtccttaaagcttctgcagaaatcggagctgccaacacttcggtg
ctagaggcagaacagagttcagtgtcacaccagctcctgaatacagttgaaaacctacag
agtgctcttctgtttgggaaagaaccggatgatgaaccaacagtccttagcgctccttct
gccacaatgtacatacacagattgcaagcagaaaacatggatggcacatccatcaatatc
tccaattccagctctgccagctttactctcccacctgcttcctctctcagtgtttcagga
gttgatggtgaaacagtggatataaggatggtgagctttgccgtgaatccctttttctcc
agtgagaccagttttgacatcagcggaacagtgggaggtctaagtcttactggtctggat
ggcttgatcataccagtcagcaatctcaaagaaaacattgaaataatgttaccaaggctt
tcagcagctcaggaagataggattctgctgaatctgggcaattttagcactttccaagtc
aatgttacctcagaaaacacatctatagtgatccacctggaatgcgaacatgatattcca
ctaatactctacttagggtatggttatcgtccaaatgaaactaactatgatatgaaaaat
catctgttctataagaaaactgctggaggtgagacaaacacttgggttctcgggccagaa
gaacttgtttttggagagggaacctactatttcatggttttacaagatatgggaatggat
tccacagtctatgacaggctaactgtagctgtcacttgcttcgcatcccgctgtgtattt
tgggatgagcaccaggggaactggaacagctatggatgtcatgtaggaccaaaaacaaat
cctagaagcacacagtgcctctgcaatcatctgaccttctttgggagctccgtctttgtc
atacccaatactgtagatgttaccaaaactgtagagctatttggcacatttgtggacaac
cctgtggtggtgacaactgtaggatgcatctttctgatatatgtacttgtagttatttgg
gctcgaaggaaagacatccaggatgatgccaaagtgaaaatcacagtactggaagacaat
gacccttttgctcagtatcgttatcttgtgacagtttttacaggacaccgccgcagggca
gccacaacctccaaggtgactctcaccctctatgggctggaaggagagagtgagccacac
catctaactgatcctgagagtccagtctttgaacggggaggagtggatgttttcctgctc
tgtaccttcttccctcttggtgaactgcagagtattagattgtggcatgataattcaggg
gacagtccctcctggtacgtgaatcgtgtattggtccatgatctggcaggggatcagaaa
tggtacttcctctgtaactcttggctggccattgacattggagaatgtgtccttgataaa
gtgttcccagtagctacagaacaggacatgaagcagttcagcaatctgtttttcattaag
acttccaagggtttccaggacgggcacatctggtactcagttttcagccgctccccacga
agctccttcacacgagcccagcgcgtgtcatgttgcttctcactgcttctctgcactatg
ctgaccagcctcatgttctggggagtgccaaaggatccagctgagcagaaaatggatttg
ggtaagatcgagttcacatggcaggaagtgatgattggctttgagagctccctcctcatg
ttccccatcaacctgctcattgtgcagatcttcaggaacgtacgatcccagccagccatg
caggggagagagaagaagccaggaaagagtggtcgagtgtccccaagcctgcctcccacc
ccacaggtcacccaggctgtctcactcactccagaggctgtgacaaaggatataagaaga
attgccaactcactctttaaggccctgaagactccatctctcacttcagtatcagatctt
ggaaaatcaactaacatcaacacacttttggcattggttgaggacatcatctgccaacag
aacagagctgggcaagggttttatgatgacagcaagaagaaggacgaccctataattgtc
acgttaggtgctgtggatatacaagaaaaaacaagaagcccaattccagagaagggaacg
tgtgagcgactgaaacacagtgattacaaccgctgcttgtacatgcaactccagcatgta
gagatggagctggaattactcgggcccaataaatttcagatgcctcagagttacacacaa
gctgttcgacaggttcaacacatgaagaacctcctggagaaccagatctgctcatcagcg
tctgtcagtgaggggtggtcccttactccaagcttctccggtgatggcaagaaaagttcc
tcttccaaagggctgccctggtggtttgtgttcattgcttggttccttgttgcagccacc
agtggtgtatctgggttcttcaccatgctctacgggctgcattatggcaaggagaactcc
atcaagtggctgatctccatggccatctccttcttggaaagtctttttatcacacagccc
ttaaaggtgctgggatttgctgctttttttgctctggttctgaagaaggtggaacatgag
gatgaagaaaacacagctattgatgggcctttatctgcaccaggtgattcaaatcctctc
tttggagcccgaagggacagtagaagcaacatttaccggccacctcctgcagctgatgtg
gagaaaatgaaaatcagctgcctgaaggagcaaaaagcatttgccctgatcagagaaatc
ctggcctatctggggtttttatggatgctgttactggttgcctatgggcagagagatccc
aattcctactacttaaacaaacacattgaaaacagctttacagatggattccacgatgtc
tacagttatcaggactttttcacatgggcaaacactaccttagtcaaaaatctttatgga
tcctataaaggattcatcacagatggcaattccaagctggtgggtagtgctcggattcgc
caagtacgagtgaaaggagacacttgccctatttctcccaaactgcagcgtgtgatgcag
gaatgccatgctccatattccctacaaacagaggacacagcagattatggagagcactgg
aattcttcagtctctgataactcctctgacttgagctcagcgtggcagtatcagagtcag
tcccaactgagagggcagcccagttggggcaaacttgcgatctacggaggtgggggatac
gtcattcacctgggaactgatccgaagaatgcctccagaattctccagtaccttttcaac
aacgtctggctggactccttcacaagagcggtgtttgttgaatttaccgtctacaatgcc
aatgtgaatctgttctgccttataagcctgatgtttgaaaccaatgctctaggggccttc
ttcacaagcgcagagctgcaaagtatccggctttacccatacaccaacagtctccacatc
tttgtcattgcagcagaagtgatttatttcctctttattgtgtactacatgatagtacag
ggaaaacagatgaagactctgagatggagatacttccacagcaagtggaatctcctggag
atggccattatactgattagctggagtgctctgtcagtgtttgtgaagcggacaatcctt
gggacccgagacatcagctactaccaggaacacaaagaggactgtgtaagctttaatgaa
acagcaagagctgatgcggttcttggctacctgattgcgttcctagtgcttctctccacc
gtgaaactgtggcacctcctgaggctcaaccctaaactaaacatgatcacttcaacccta
aggagggcatggggtgatatctctggattcatcactgtgattgccatcatgttcctcgcc
tattccattgcgacaaacctgatatttggctggaagctctactcgtacaaaactctcttt
gattcagcagagaccatggtcagtcttcagctgggaatcttcaactatgaggaggtcttg
gactacaatccaattttaggctccttcttaattggatcctgcataattctcatgacattc
gtggtactgaatctgttcatttcggtgattctagttgcttttagcgaggagcagaagcac
taccaggcttcagaagaagaggagatcgttgatctaatgctaacgaaaattttcagtttc
ttggggattaaatgcaagaaggaagagaagccagtcactaacgatcaactgaaacagcct
gtcagcaattaa
DBGET
integrated database retrieval system
