Caloenas nicobarica (Nicobar pigeon): 135991989
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Entry
135991989 CDS
T11056
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135991989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135991989
03036 Chromosome and associated proteins [BR:
cnic03036
]
135991989
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135991989
Coactivators
SAGA/TFTC/STAGA complex
135991989
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135991989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
135991989
NCBI-ProteinID:
XP_065496962
LinkDB
All DBs
Position
9:12845694..12988441
Genome browser
AA seq
1046 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRGSAEAPQPRTSAPSQQQPQQQ
QQHQGSLAGGSSPVRQQQGHPAPPPAPGAEEAAGCPGAAESRAPAQGPLPSPPAAAAAAA
AAAAAGRGASVNSSSVQQSHGAALLSSGGSSPAAPAPPQPAAPPPAGAPAQPVNSHVAAG
AAARDAGSPSPGGSPPAADSAPPQRAEAAAGNETPAGGNGPAGAAEGAAAATTAPLPGEA
APNGEGAGGRPAAAPPVSSHGRADAATAQTKPAPGPLPAVNALSNSASPAPNAAAPPGQG
SAASCAPAAPGAAPKPAVPAKAGAALPVAPAAPQALSPRPAMGAAPRIVAPQLIVRPPQQ
PAIQQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPTSISPR
LSVPTTGPVFRLSTTQQPPSVATSTVRLGLPVQAKVVQSTAAPVSATSAGALPGGSILSH
TTVSVATTSAQNLFKTTVATGTSASQQPAVISGGQTQASAQNQGQPRLPLPPHTTAQVPA
QPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLD
AKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTK
LPQVIPQSASGSISSVVATQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQS
TSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQAGKSPGGFGVQVSANQKNKL
NDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHK
RILEMAKKLGITDVPTEVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDEWYEQATDV
RSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMR
QRDANLTALAAIGPRKKRKLDSPGLLTIGGEGVGMSGGSQAGVGAPSSRQYARQKITRVN
LRDFIFYMEQERETSHSLLLYRALLK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgacctggtgggctccttggaatcgcagctggccggcggccggggc
tccgccgaggcgccccagcccaggacctccgccccgtcccagcagcagccgcagcagcag
cagcagcaccaggggagcctagcggggggcagcagcccggtccggcagcagcaagggcat
cccgcgccccctcccgcgcccggggcagaggaggcggcggggtgccccggagccgcggag
agccgagcgcctgcccaggggccgctcccgtcccccccggcggcagcggcggcggcggcg
gcggcggcagcggcagggaggggagcgagtgtaaacagtagtagtgtgcagcaatcacat
ggagcggctctgctcagcagcggcggcagcagccccgccgcccctgccccgccgcagccc
gccgcccccccgcccgccggcgcccctgcccagcctgtcaacagccatgtggctgccggc
gccgccgcccgggacgcggggagccccagccccggcggcagcccgcccgccgccgacagc
gcaccgccgcagcgcgccgaggccgcggcggggaacgagacccccgcggggggcaacggg
ccggcgggagcggcggagggcgccgccgccgccacgaccgcgccgctccccggcgaggcg
gcgcccaacggggagggcgccgggggccggccggcggcagccccgccagtcagcagccac
ggcagagccgacgccgccacagcacagaccaagcccgcgcccggcccgctccccgcagta
aacgcactcagtaactccgccagccccgcgcccaacgcggccgccccgccgggacagggc
tcggccgccagctgcgccccggcggcccccggagccgcgcccaagccggcggtccccgcc
aaggcgggcgctgccctccccgtcgcccccgccgccccccaggccctgtcgcccaggccg
gcgatgggcgctgccccccggatcgtggccccccagctgatcgtgaggccgccgcagcag
cccgccatccagcagaccaccatccagctgccccccggcttcaccatcccgcccggtatg
gtcttggtgcgcacggatgctgggcagcttgtaatggtgcctcagcaggctctggcgcag
gctcaaatgcaggctcaagtacagacacagggacagggccctaccagcatctcacccaga
ctctcagtgcccacaactggccccgtttttcgcctatcaacaactcagcaaccaccctct
gtagccacatccactgtccgcctgggacttccagtgcaagccaaagttgttcagtcaacg
gctgcgcccgtcagtgccacgtctgctggggctctgccgggaggctctattctctcacat
accacggtatcagtagctacaacgagtgctcaaaatttattcaagacaacagtagcaact
ggaacatcagcttctcagcaacctgcagtaattagcggtgggcaaactcaagcttcagca
caaaaccagggtcagcctcggctgccgcttccacctcatacaacagcacaagtcccagcg
cagccccaggtcataccgagctctcctgtacctggaactacagttgtatcacaggaaatg
caagagaatgtgaaaaaatgtaaaaactttttagctacccttataaaacttgcttctcat
aactcgccatctccagaaacgtcccgtaatgtgaaagctctggttcaggatttgttggat
gcaaagattgacccagaagaatttacaggccgccttcagtcggaactcaaatcatctcct
cagccataccttgtacctttccttaagaaaagtctacctgcattgagacaatctttactg
aatagtcaacattcagttttgcaaggacagccgtctcagcagtcacttcaacaaaccaag
ctaccacaagttatacctcagtctgcctctggaagcatttcctctgttgtcgcaacgcag
acaataggaataaggcaaccaaacaacatttgcacagtctctgtatcaaatacagtgcag
cctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcagattatccagtca
acatctgctcaaactgtgaaacgaaaccctgcttgccagactacccagattaggatgcca
gtggtaataactcagaccattagaccacaaggcacagtagggaaggcaccaacaatacaa
gccggcaaaagtcctgggggctttggtgttcaggtctctgcaaatcagaaaaacaagctg
aatgaccctggaggtggttctttcagagatgatgatgacatcaatgatgttgcctctatg
gctggtgttaatcttaatgaagaaagtgcccgaattatggctaccaactctgacttggtt
ggaacccagatacagtcctgtaaagatgaaccttttcttgctgctatacctctacataaa
cgcatacttgaaatggctaaaaaactaggaattactgatgtaccaactgaggtggttact
tttatttcccatgcaacacaaaacagattaagaacagtgatagagaaggtaacagtgata
acccagcaccgaatggaatcatacaaggatgacgaatggtacgaacaagctacagatgtc
cgatcgcagttaaagttttttgaacagttggagcgtttagaaaagcaaaggaaagatgaa
caagagagggaaatcttgctaaaggctgccaagagtcgctcaaggcaagaagacccagag
caagctagactgaaacaaaaagcaaaggagatgcagcaacaagaacttgcacaaatgagg
cagagggatgccaatctaactgcactggcagctatcggtccccggaagaaacggaagctt
gattcacctggactgcttaccataggaggagagggcgtcggtatgtccggtgggagtcag
gctggcgtgggggctccttcgtcccggcagtatgcacgacagaaaataacgcgcgtaaac
ctcagggacttcatcttctacatggaacaggaaagagaaacgagccattctctcctgctc
tatcgagctctgcttaaataa
DBGET
integrated database retrieval system
