Caloenas nicobarica (Nicobar pigeon): 135992064
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Entry
135992064 CDS
T11056
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135992064 (RFWD3)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135992064 (RFWD3)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135992064 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
Beta-prop_WDR5
zf-RING_UBOX
zf-rbx1
WDR55
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
EIF3I
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
zf-UDP
Nairovirus_Gn
zf-RING_11
Rtf2
CALCOCO1
Myo5a
zf-C3HC4_4
Beta-prop_RIG_2nd
CFAP43_N
Casc1_N
WD40_2
Beta-prop_WDR36-Utp21_2nd
DUF7837
Beta-prop_RSE1_2nd
zf-Nse
WD40_Prp19
zf-RING_Vps41
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR75_1st
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
135992064
NCBI-ProteinID:
XP_065497071
LinkDB
All DBs
Position
9:complement(18033210..18053968)
Genome browser
AA seq
741 aa
AA seq
DB search
MAQEEMEIDLQPVAGYSVENFGTLPTEPSVHAVPVLSEGRGSITVLPADDAVVTLNAGAT
REAAAEPDLQSGPASALNGLQRLQGAFDPHRPLPQATQRPGVRRARRQQRIGGSQRTISA
RAALDSYFQVSRTQEPAAAPVPHLEPSHIARDNQEHSSDETIEVSDSDSSSSAEEEVAVE
AAAPLLPSSQETPPAASSGVSSQVETEPPQASAEHGSHEGEEAEVQQRKRTPLKNPEASV
PVAPLDEEEGDTCTICFEQWTNAGDHRLSALRCGHLFGYMCIERWLKGQAGKCPQCNKKA
KRSDIVILYARTLKALDTSEQERMKSSLEKEQMLRRQAELESAQSRLQLQVLTDECSKLR
KQVQELKALVAQHNTSASQQPGSSRTCPPGSLPSSQSQRKYHLEKVFVVSPTGNCRVMAY
CDSLSCLVVSQPSPQSTFIPGCGVKMMSVANLKSSQYIPIHSKQIRGLAFGSRADGLLLS
AALDNTLKLTSLATNTVVQTYNAGRPVWSCCWCLDNTNYIYAGLVNGSIMIYDLRDTNSH
VQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKAGNSYRPHHLPLEP
GGCIDIQTEINTRHCLATYRPSKNNPCVRCVMMELTCSPLTEASEDVVCSSNPVQTFSAG
PTCKLLTKNAIFQSPEEDGSVFVCAGDEASNSALLWDAGSGSLLQKLQADLPVLDICPLE
VNQTHLLATLTEKMVKIYKWQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaagagatggaaattgatctccaaccagtggctggttactctgtagagaac
ttcgggacgcttcccacagagccctctgttcacgctgttccagtgctcagtgaaggaaga
ggcagcattacagttcttcctgctgatgacgctgttgtcacactgaatgctggtgcaaca
agggaagcagctgctgaacctgacctgcagtcgggtcctgcctctgctctcaacgggctt
caaaggctacaaggggcgtttgatccgcatcgaccattgccacaggccacgcagcgtcct
ggagtgcgtcgagctcgcaggcaacagagaattggtggctcccagagaacaatcagtgcc
agggcagcgttggacagttactttcaagtcagcaggacccaagagccagctgctgcacca
gttccacatctggagccttcgcatattgcaagggataaccaggaacacagctcagacgaa
acaatagaagtgagcgactctgacagcagctcctctgctgaggaggaggtggcggtggag
gctgcagcaccactgctaccgtcatcccaggagacacctccagcagctagttcaggagtt
tccagtcaggttgaaacggagccaccgcaagcttctgcagaacatggcagtcatgaaggt
gaagaggctgaagtccagcaaaggaagagaactccactaaagaacccagaggcatcagtt
cctgttgctccgctggatgaggaggaaggggatacctgcaccatctgctttgagcagtgg
accaatgccggggaccaccgtctctcagcattgcgatgtggacacctgtttggttacatg
tgcattgaaaggtggctcaagggacaggcagggaagtgcccccagtgcaacaagaaagcg
aaacgttctgatattgtgatcctgtatgctcgcaccttgaaagcgctggataccagcgaa
caggagcgcatgaaaagctctttagaaaaggagcaaatgttgcggagacaggcagagctg
gaatctgcacagagtcgtctccagctgcaggttttgacagacgaatgcagcaaactccgc
aagcaggttcaggagctgaaggccctggtggcccagcacaacacgagtgcttctcagcaa
cctggcagctcccgtacctgccccccaggcagcctcccctccagccaaagccagcgcaag
taccacttggagaaggtttttgtagtgtctccgactgggaactgcagagtaatggcatac
tgtgactcgctgagttgtctcgtggtatcgcagccttctccacaatctacttttattcct
ggttgtggtgttaagatgatgagtgtggccaacctgaagagcagtcagtacatccccatc
cacagcaaacagattcggggactggctttcggcagccgagcagacggcttgctgctctct
gctgctctggacaacactctcaaactcaccagcttagcaacaaatactgtggtgcagacg
tacaatgctggccgtcctgtctggagctgctgctggtgtcttgacaatacaaactacatc
tatgctggattggtcaatggctctatcatgatatatgatttgagagacacgaactctcac
gtccaggaactggtccctcagaagtccaggtgccccatggtatcgctgtcctatctgccc
cggatggcttcagcgtcactgccctatggtggaatattagctgggaccttggaaggcgct
tgcttttgggaacagaaagctggtaactcctaccggcctcatcacctgccactggaacct
ggaggatgcatcgacattcaaacggagatcaatacccggcactgccttgcgacgtacagg
cctagtaaaaataacccatgtgtgcgttgtgtgatgatggaactgacttgcagcccactg
acagaggcctctgaagatgtggtgtgttcttctaacccggttcagaccttcagtgctggg
cccacctgcaagctgctgaccaagaatgccatttttcagagcccggaggaggacggcagt
gtctttgtgtgcgctggtgatgaggcatccaactctgccctgctctgggatgctggaagt
ggctccttgctgcagaagctgcaggctgacctgcctgtgctggatatctgccctttggaa
gtgaaccaaacccacctcctggcgactctgacggagaagatggtgaagatctacaagtgg
cagtga
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