Caloenas nicobarica (Nicobar pigeon): 135992100
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Entry
135992100 CDS
T11056
Symbol
IRF8
Name
(RefSeq) interferon regulatory factor 8
KO
K10155
interferon regulatory factor 8
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135992100 (IRF8)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135992100 (IRF8)
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
135992100
NCBI-ProteinID:
XP_065497137
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Position
9:complement(21895204..21904658)
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AA seq
427 aa
AA seq
DB search
MCDRNGGRRLRQWLIEQIDSDLYPGLIWENEEKTMFRIPWKHAGKQDYNQEVDASIFKAW
AVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVSEEEQKC
KAGIANGSNLTDVAEMDCSSSAIDDLMKEPPCVDEYLGIIKRSPSPPQETCRNPLIPDWW
VQQPSPALPLMNGYSSYEQHHSGYSQMVISFYYSGRLVGHITTSCTEGCRISLGQPSSHG
EKLYAPEALEHVRFPSADAIQNDRQKQITRKLFGHLERGVLLHSNKQGIFIKRLCQGRVF
WSGNTMVYKDRPNKLDRDEVVKIFDTNLFFRELQFYNNQGHLPDSRVVLCFGEEFPDAVP
LRCKLILVQVEQLCVKQVVEEARKTCSSSPLLPIADETQHDQVYRIFQDICGTHQRPLFR
ENQQIAV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccgtaacggcgggcggcggctccggcagtggctgatcgagcagatcgacagt
gacttgtaccctgggctcatctgggagaacgaggagaaaaccatgttccgcatcccatgg
aaacacgctgggaagcaggactacaaccaggaggtggatgcttctattttcaaggcctgg
gctgttttcaaaggcaaattcaaagaaggtgacaaagcagaaccggctacgtggaagacg
cgcctgcgctgtgccctgaacaagagccccgactttgaggaggtgacggacaggtcccag
ctggacatctccgagccctacaaggtctacaggattgtgtcagaggaggaacagaaatgc
aaagcgggcattgccaacgggagcaacctcaccgacgtggcggagatggactgcagctcc
tcggccatcgacgacctcatgaaagagcccccctgtgtagacgaatacttggggatcatc
aagagaagcccctcacccccccaggagacctgcagaaaccccctgatacccgactggtgg
gtgcagcagcccagccctgcgttgccactgatgaacggatactccagctacgagcagcat
cactcgggttactctcagatggtgatcagcttctactacagcgggaggctggttggacac
atcaccacctcgtgcaccgagggctgccgcatttcacttggccaaccctccagccatggc
gagaagctctatgccccagaagccctggagcacgtgcggttcccctcagctgacgccatc
cagaatgaccgtcagaagcagatcaccaggaagctctttgggcacctggagaggggcgtc
ctgctgcacagcaacaagcagggcatcttcatcaagaggctgtgccagggcagggtcttc
tggagtggcaacaccatggtctacaaggacaggcccaacaaactggatcgggatgaggtg
gtgaagatatttgacaccaacttgttcttcagagagctgcagttttacaacaaccagggc
cacttgccggacagcagagtcgtgttgtgctttggagaggagttcccggatgccgtgccg
ctgcggtgcaagctaatccttgtccaggtggagcagctgtgtgtcaagcaggtggtggag
gaggctcggaagacctgcagcagtagccccctgctccccatcgctgatgagacccagcat
gaccaggtctacaggatcttccaggacatctgtgggacgcaccagcggccactcttcagg
gaaaaccaacagattgctgtttga
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