Caloenas nicobarica (Nicobar pigeon): 135992112
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Entry
135992112 CDS
T11056
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135992112 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135992112 (EXOSC6)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135992112 (EXOSC6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135992112
NCBI-ProteinID:
XP_065497154
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All DBs
Position
9:17168805..17170285
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AA seq
278 aa
AA seq
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MPLDHRRLQGPEESQPPEVWAAAGGSGEVPEEEDAAPRDPCALRPLFARAGLLSQAEGSA
YVELSGGTKVLCAAWGPREAAEPGGAAAGAGWLLCEFRRAPFAGRGARWRPGSAAEREAE
REAAAALREALEPAVRLARYPRARLAVSALLLQDGGSALAAAISAAALALADAGVEMYDL
AVGCALCRAPGPAAAWMLQPGEPEERRAVAQLTVALLPALNQVSAVLGGGQGSPPDTWAE
ALRLGLDGCHRLYPVLRQSLLRAARRRDAAAAAAATTA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggatcaccgccggctgcagggcccggaggagtcgcagccgccggaggtttgg
gcagcggccgggggaagcggggaggtaccggaggaggaagatgcggccccgcgggacccc
tgcgccctgcggccgctcttcgcccgggccgggctgctgagccaggcggagggttcggcc
tacgtggagctgagcggcggcaccaaggtcctgtgcgccgcgtggggcccgcgggaggcg
gccgagcccggcggggcggcggcaggggcggggtggctgctctgcgagttccgccgggcg
cccttcgccgggcgcggggctcggtggcggccgggctcggcggcggagcgggaggcggag
cgggaggcggcggcggcgttgcgggaagcgctggaaccggccgtgcgcttggcccggtac
ccgcgggcccgcctggccgtcagcgccttgctgctgcaggacgggggctccgcgctggcc
gccgccatcagcgccgctgccctggccctggctgatgccggggtggagatgtacgacctg
gccgtgggctgtgccctgtgccgggctcccgggcccgccgccgcctggatgctgcagccc
ggggagcccgaggagcgccgtgccgtcgcccagctcaccgtggctcttctgcctgctctg
aaccaggtgtcggcggtgctggggggtgggcagggcagccctcccgacacctgggcagag
gcgctgcgcctcggcctcgacggctgccaccgcctgtaccccgtgctgcggcagagcctg
ctgcgggctgcccgccgccgtgatgccgctgctgccgccgccgccaccactgcctga
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